Microbacterium rhizosphaerae: SM116_05115
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Entry
SM116_05115 CDS
T09585
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00260
Glycine, serine and threonine metabolism
mrg00460
Cyanoamino acid metabolism
mrg00630
Glyoxylate and dicarboxylate metabolism
mrg00670
One carbon pool by folate
mrg00680
Methane metabolism
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01200
Carbon metabolism
mrg01230
Biosynthesis of amino acids
mrg01240
Biosynthesis of cofactors
mrg04981
Folate transport and metabolism
Module
mrg_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SM116_05115 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SM116_05115 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SM116_05115 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SM116_05115 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SM116_05115 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SM116_05115 (glyA)
Enzymes [BR:
mrg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SM116_05115 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WPR90673
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Position
1161454..1162728
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AA seq
424 aa
AA seq
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MTDQFFNAPLAEVDPEIAQVLERELERQRGYLEMIASENFVPVSILQSQGSVLTNKYAEG
YPGRRYYGGCEEVDVAEELAIQRAKELFGAAFANVQPHSGATANAAVLHAIARPGDTLLG
LSLDQGGHLTHGMKINFSGRLYNIVAYGVDPETSVIDMDEVARLAREHQPKVIIAGWSAY
PRQLDFARFREIADEVGALLWVDMAHFAGLVAAGLHPNPVPHAHVVSSTVHKTIGGPRSG
FILTNEEDIAKKINSAVFPGQQGGPLMHVIAAKATAFKLAGTPEFTERQERVLRGAHIIA
ERLSQQDVKDAGIAVRSGGTDVHLVLVDLRDAAIDGKQAEDLLHEIHITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDAEFTEVADVIALALQPGADVEALRARVAALTAAFPLYP
GLQQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccagttcttcaacgccccgctcgccgaggtcgatcccgagatcgcccaggtg
ctcgagcgggagctcgagcgtcagcgcggctacctcgagatgatcgcctccgagaacttc
gtgcccgtgtcgatcctgcagtcgcagggctccgtgctgacgaacaagtacgccgagggc
tacccgggccgccgttactacggcggctgcgaggaggtcgacgtcgcggaggagctcgcc
atccagcgcgccaaggagctgttcggcgccgccttcgccaacgtgcagccgcactccggc
gccacggccaacgccgcggtgctgcatgcgatcgcgcggcccggcgacacgctgctcggt
ctctcgctcgaccagggcggccaccttacccacggcatgaagatcaacttctcgggccgg
ctctacaacatcgtcgcctacggcgtcgaccccgagacctccgtcatcgacatggacgag
gtcgcccgcctcgcccgcgagcaccagcccaaggtgatcatcgccggctggtcggcgtac
ccgcgtcagctcgacttcgcgcgcttccgcgagatcgccgacgaggtcggcgcgctgctg
tgggtcgacatggcgcacttcgccggcctggtcgccgccggcctgcacccgaacccggtg
ccgcacgcgcacgtcgtctcctcgacggtgcacaagacgatcggcggaccccgctcgggc
ttcatcctcaccaacgaggaggacatcgccaagaagatcaactcggccgtcttcccgggg
cagcagggcggtccgctcatgcacgtcatcgccgccaaggcgacggcgttcaagctcgcg
ggcacgcccgagttcaccgagcgccaggagcgggtcctgcgaggtgcgcacatcatcgcc
gagcggctctcgcagcaggacgtgaaggatgccggcatcgcagtgcggtcgggtggcacc
gacgtgcacctcgtgctcgtcgacctgcgcgacgcggcgatcgacggcaagcaggccgag
gacctcctgcacgagatccacatcaccgtcaaccgcaacgccgtgccgaacgacccgcgt
ccgccgatggtgacgtcggggctgcgcatcggcacgcccgcgctggcgacccgcggcttc
ggcgacgccgagttcaccgaggtggccgacgtcatcgcgctcgcgctgcagccgggggcg
gatgtcgaggcgctgcgtgcgcgtgtggccgccctgaccgcggccttcccgctgtacccg
ggcctgcagcagtaa
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