Microbacterium rhizosphaerae: SM116_05560
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Entry
SM116_05560 CDS
T09585
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00020
Citrate cycle (TCA cycle)
mrg00190
Oxidative phosphorylation
mrg00650
Butanoate metabolism
mrg00720
Other carbon fixation pathways
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01200
Carbon metabolism
Module
mrg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrg_M00149
Succinate dehydrogenase, prokaryotes
mrg_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SM116_05560 (sdhA)
00650 Butanoate metabolism
SM116_05560 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SM116_05560 (sdhA)
00720 Other carbon fixation pathways
SM116_05560 (sdhA)
Enzymes [BR:
mrg01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SM116_05560 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
DAO
Pyr_redox_2
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
WPR90760
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All DBs
Position
complement(1289725..1291527)
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AA seq
600 aa
AA seq
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MSTQTADSIVKDGVHYHQFDIVIVGAGGAGMRAAIEAGPGAKTAVISKLYPTRSHTGAAQ
GGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLENMGLPFNRTP
EGKIDQRRFGGHTADHGKTPVRRACYAADRTGHMILQTLFQNCVKLGINFFNEFYVLDLI
TVGEGRNKQIAGVVAYELATGDLHVFQSKAVIFATGGFGKIFKTTSNAHTLTGDGVGIVW
RKGLPLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNASGERFMERYAPTIKDLAPRD
IVSRCMVQEVAEGRGAGPHRDYVLLDCTHLGAEVLETKLPDITEFARTYLGVDPVVEPVP
VMPTAHYAMGGIPTNNKAEVLSDNTTVVPGLYAAGECACVSVHGSNRLGTNSLLDINVFG
KRAGRNAVEYVKTAEFVPLPENPAQAVSDMIEKLRNNAGTERIAVLRKTLQDEMDRKAQV
FRTDESLGEVLGTIEELRDRYLNVHVDDKGKRYNTDLLEAVELGFLLDLAEVVVYAARNR
KESRGGHMRDDYPKRDDENYMQHTMAYLTGDAHSSDASDHITLDWKPVVVTRYQPMERKY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcagaccgcggattccatcgtcaaggacggcgtccactaccaccagttcgac
atcgtcatcgtgggcgccggcggcgcggggatgcgggcggccatcgaggccggccccggg
gcgaagaccgccgtcatctccaagctgtaccccacgcgctcgcacacgggtgcggcgcag
ggcggcatggcggcggcgctcgccaacgtcgaagaggactcgtgggagtggcacaccttc
gacaccgtcaagggcggcgactacctcgtcgaccaggacgcggcggagatcctggcgaag
gaggccatcgacgcggtcatcgacctcgagaacatgggcctgccgttcaaccggacgccc
gagggcaagatcgaccagcgccgcttcggcgggcacacggccgaccacggcaagaccccg
gtgcgccgcgcatgctacgccgccgaccgcaccggccatatgatcctgcagacgctgttc
cagaactgcgtgaagctcggcatcaacttcttcaacgagttctatgtcctcgacctcatc
acggtcggtgagggcaggaacaagcagatcgccggcgtcgtggcgtacgagctggccacg
ggcgacctgcacgtcttccagtccaaggccgtcatcttcgccacgggcggcttcggcaag
atcttcaagaccacctcgaatgcgcacacgctcaccggcgacggcgtcggcatcgtgtgg
cgcaagggcctccccctcgaggacatggagttcttccagttccacccgacggggctggcc
ggactcggcatcctcctcaccgagggcgcgcgcggtgagggcgcgatcctccgcaacgcg
agcggcgagcgcttcatggagcgctacgcccccaccatcaaggacctcgccccgcgtgac
atcgtgagccgctgcatggtccaggaggtcgcggaaggccgcggcgccggtccgcatcgc
gactacgtgctgctggactgcacgcacctgggcgccgaggtgctcgagaccaagctcccg
gacatcaccgagttcgcgcgcacgtacctcggtgtcgaccccgtcgtcgagccggtgccg
gtcatgccgaccgcccactacgcgatgggcggcatcccgaccaacaacaaagccgaggtc
ctctccgacaacacgaccgtcgtgcccggcctctatgccgccggcgagtgcgcgtgcgtg
tcggtgcacggctccaaccggctcggcacgaactcgctgctcgacatcaacgtgttcggc
aagcgcgccggccgcaacgccgtggagtatgtgaagaccgccgagttcgtcccgctgccg
gagaacccggcccaggccgtctccgacatgatcgagaagctgcgcaacaacgccggcacc
gagcgcatcgccgtcctgcgcaagacgctgcaggacgagatggaccgcaaggcccaggtg
ttccgcacggacgagtcgctgggcgaggtgctcggcacgatcgaggagctgcgcgaccgc
tacctgaacgtgcacgtcgacgacaagggcaagcggtacaacaccgacctgctcgaggcc
gtcgagctcggcttcctcctcgacctcgccgaagtcgtggtctacgcggcccgcaaccgc
aaggagagccgcgggggccacatgcgcgatgactaccccaagcgcgacgacgagaactac
atgcagcacacgatggcgtacctgaccggggacgcgcactcgtcggacgcgtcggaccac
atcacgctggattggaagcccgtcgtcgtgacccgctaccagccgatggagaggaagtac
tga
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