Microbacterium rhizosphaerae: SM116_06720
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Entry
SM116_06720 CDS
T09585
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SM116_06720 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrg03021
]
SM116_06720 (rho)
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_06720 (rho)
Transcription machinery [BR:
mrg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SM116_06720 (rho)
Messenger RNA biogenesis [BR:
mrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SM116_06720 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
PIP5K
Spore_III_AA
AAA_22
eIF-3_zeta
VWA_2
Mor
Motif
Other DBs
NCBI-ProteinID:
WPR90980
LinkDB
All DBs
Position
1543359..1545569
Genome browser
AA seq
736 aa
AA seq
DB search
MESISEIHNDGAPVDDRTDADVVEESVAEDQAAAEAVAEDIAADAAQLADEAAAAERVAE
ELAGEAVEIEAVVEQLEAEGETEAAAVGEEIAEEVAAEAVIAEEVAEAAAEEAVVEAVEA
EVVAEAVAEAAAEETPAAAPAEGAAEAEKPVKAPRKRAPRRAKSTDVVTPAEAPAETGAE
APAEPGAEAPAETGAEAPAETPAAEGAPNVEEPVAETAGVAEQAAEASESAEAAEPAEGA
ETPRRSRSRSRSRGRGQAQQPDAAEGADKGEAEAMPPQGQNGQQGQNPQGQNQQGQNQQG
QNQRDQSQQGQNSRNRQRNKRRTPGAPADEFETEIGEDDVLIPIAGILDVLDNYAFVRTS
GYLPGPSDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSGRQKYNALVKVDAVNGLSVD
DAATRVEFGKLTPLYPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVL
QQIADAIAKNNPEVHLMVVLVDERPEEVTDMQRSVRGEVIASTFDRPAEDHTTVAELAIE
RAKRLVELGRDVVVLLDSITRLGRAYNISAPTSGRVLTGGVDASALYPPKRFFGAARNIE
NGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRRE
EMLLSADEVKITWKLRRALAGLDPQQALEVVLGKLKETQSNVEFLVQMQSAQLKTTASGR
ESHGGGHSHAHDNSIR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccacaacgacggcgcgcccgtcgacgaccgcaccgacgcg
gacgtcgtcgaggagtccgtggctgaggaccaggcggccgcggaggccgtcgccgaagac
atcgcggcggacgccgcacagctggccgatgaggccgccgcggccgagcgggtcgcggag
gagctcgccggggaggccgtcgagatcgaggccgtcgtcgagcagctcgaggccgagggc
gagaccgaggccgcggccgtcggtgaggagatcgccgaggaggtggccgccgaggcggtc
atcgccgaggaggtcgccgaggccgctgccgaggaagccgtcgtggaggcggtcgaggcc
gaggtcgtcgccgaggctgttgcggaggccgccgccgaagagacgcccgctgcggccccc
gccgaaggggccgccgaggccgagaagcccgtgaaggcaccgcgcaagcgtgcgccgcgt
cgggcgaagagcaccgacgtcgtgacgcccgcagaggctccggccgagaccggcgctgag
gctccggccgagcccggcgctgaggctccggccgagaccggcgctgaggctccggccgag
acgccggccgccgagggcgcgccgaatgtcgaggagcccgtcgccgagacggccggcgtc
gccgagcaggccgccgaggcttccgagtcggcggaggccgcggagccggcggagggcgcg
gagacgccccgtcgttcgcgcagccgcagccgttcacgcggacgcggccaggcccagcag
cccgacgccgcggagggtgccgacaagggcgaggccgaggccatgcccccgcagggtcag
aacggccagcagggccagaacccgcagggtcagaaccagcagggccagaaccagcagggt
cagaaccagcgggatcagagccagcagggccagaacagccgcaaccgccagcgcaacaag
cgccgcaccccgggtgctccggccgacgagttcgagaccgagatcggcgaggacgacgtc
ctgatcccgatcgccggcatcctcgacgtgctcgacaactacgcgttcgtgcgcacctcg
ggatacctgccgggcccgagcgacgtctacgtcagcctcggccaggtcaagaagtacaac
ctgcgcaagggcgacgccgtcgtcggtgcgatcaagcagccccgcgagggcgagcagtcc
ggccgccagaagtacaacgccctggtcaaggtcgacgcggtcaacggcctctccgtcgat
gacgccgccacgcgcgtggagttcggcaagctgacgccgctctacccgcaggagcgcctg
cgcctcgagaccgcgcccgagaagctgacccagcgcatcatcgacctggtcgccccgatc
ggcaagggccagcgcggcctgatcgtcgccccgcccaaggccggcaagacgatcgtgctg
cagcagatcgccgacgccatcgccaagaacaaccccgaggtccacctcatggtcgttctc
gtcgacgagcgtccggaggaggtcaccgacatgcagcgcagcgtccgcggcgaggtcatc
gcctcgacgttcgaccgccctgccgaggaccacacgacggtcgccgagctcgccatcgag
cgcgccaagcgcctcgtcgagctcggccgcgacgtcgtcgtgctgctcgattcgatcacg
cgcctcggccgtgcgtacaacatctccgcgccgacgtccggccgcgtgctcaccggcggt
gtcgacgcatccgccctgtacccgcccaagcgcttcttcggcgccgcgcgcaacatcgag
aacggcggatcgctcacgatcctcgccaccgcgctcgtcgagaccggctccaagatggac
gacgtcatcttcgaggagttcaagggcacgggcaacagcgagctgcgcctgtcgcgccag
ctcgccgacaagcgcatcttcccggccgtcgacgtcaacgcgtcgagcacccgtcgcgag
gagatgctgctcagcgccgacgaggtcaagatcacctggaagctgcgtcgggcgctcgcg
ggcctcgacccgcagcaggccctggaggtcgtgctcggtaagctgaaggagacgcagtcg
aacgtcgagttcctcgtgcagatgcagtcggcgcagctgaagacgacggcatccggccgg
gagagccacggcgggggccacagccacgcgcacgacaacagcatccgctga
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