KEGG   Microbacterium rhizosphaerae: SM116_07710
Entry
SM116_07710       CDS       T09585                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mrg  Microbacterium rhizosphaerae
Pathway
mrg00010  Glycolysis / Gluconeogenesis
mrg00020  Citrate cycle (TCA cycle)
mrg00260  Glycine, serine and threonine metabolism
mrg00280  Valine, leucine and isoleucine degradation
mrg00310  Lysine degradation
mrg00380  Tryptophan metabolism
mrg00620  Pyruvate metabolism
mrg00630  Glyoxylate and dicarboxylate metabolism
mrg00640  Propanoate metabolism
mrg00670  One carbon pool by folate
mrg00785  Lipoic acid metabolism
mrg01100  Metabolic pathways
mrg01110  Biosynthesis of secondary metabolites
mrg01120  Microbial metabolism in diverse environments
mrg01200  Carbon metabolism
mrg01210  2-Oxocarboxylic acid metabolism
mrg01240  Biosynthesis of cofactors
Module
mrg_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mrg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mrg_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mrg00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SM116_07710 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SM116_07710 (lpdA)
   00620 Pyruvate metabolism
    SM116_07710 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SM116_07710 (lpdA)
   00640 Propanoate metabolism
    SM116_07710 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SM116_07710 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SM116_07710 (lpdA)
   00310 Lysine degradation
    SM116_07710 (lpdA)
   00380 Tryptophan metabolism
    SM116_07710 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SM116_07710 (lpdA)
   00670 One carbon pool by folate
    SM116_07710 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mrg04147]
    SM116_07710 (lpdA)
Enzymes [BR:mrg01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SM116_07710 (lpdA)
Exosome [BR:mrg04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SM116_07710 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 NAD_binding_8 FAD_binding_2 HI0933_like GIDA DAO Thi4 FAD_oxidored 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl Amino_oxidase 2-Hacid_dh_C ThiF TrkA_N
Other DBs
NCBI-ProteinID: WPR91161
LinkDB
Position
complement(1761554..1762951)
AA seq 465 aa
MPHYDVVILGAGPGGYVAAVRSAQLGLSVAVIEEKYWGGVCLNVGCIPSKALLKNADLAH
TFHAKADLFGISGDVHFDFGVAHDRSRKVSETHVKGIHFLMKKNKVTEYDGRGTFVDAHT
IDVAKNDGTSERVTFTNAIISTGSTVRLLPGVQLSENVVTYEEQILTRELPDSIVIVGAG
AIGMEFAYILSNYGVTCTIIEFLPRALPNEDEEVSKEITRQYKKLGVEILTSTKVESVTD
HGDRVTVAYTAQDGTAGQIDADKVLMSIGFAPNVEGFGLENTGVKLTERGAIDIDDHMRT
NVEGIYAIGDVTAKLQLAHVAEAQGVVAAETIANAETMTLGDYRMMPRATFCNPQVASFG
LTEQQARDAGYDVKVAKFPFSANGKANGLGEPVGFVKVIADGEHLELLGAHMIGPDVSEL
LPELTLAQKWDLTALEAARNVHTHPTLSEAVQEAFHGLAGHMINL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcctcactacgacgtcgtcatcctcggcgcgggccccggcggttacgtcgcggccgtg
cgcagcgcacagctcggcctctcggtcgccgtcatcgaagagaagtactggggcggcgtc
tgcctcaacgtcggctgcatcccctcgaaggcgctgctgaagaacgcggacctcgcccac
acgttccatgcgaaggccgatctgttcggcatctcgggcgacgtgcacttcgacttcggc
gtcgcacacgaccgcagccgcaaggtgtccgagacgcacgtcaagggcatccacttcctc
atgaagaagaacaaggtgaccgagtacgacgggcgcggcacgttcgtcgacgcgcacacg
atcgatgtcgccaagaacgacggcacctccgagcgcgtcaccttcacgaacgcgatcatc
tccacgggctcgaccgtgcgtctcctccccggcgtgcagctcagcgagaacgtcgtcacg
tacgaggagcagatcctcacgcgcgagctccccgactcgatcgtcatcgtcggcgccggc
gcgatcgggatggagttcgcctacatcctcagcaactacggcgtgacgtgcacgatcatc
gagttcctcccccgcgccctcccgaacgaggacgaggaggtctcgaaggagatcacccgc
cagtacaagaagctcggcgtcgagatcctcacctcgaccaaggtggagtcggtcaccgac
cacggcgaccgcgtcaccgtcgcgtacaccgcgcaggacggcacggcgggccagatcgac
gccgacaaggtgctcatgtcgatcggcttcgcaccgaacgtcgagggcttcggcctggag
aacacgggcgtcaagctcaccgagcgcggcgcgatcgacatcgacgaccacatgcgcacg
aacgtcgagggcatctacgccatcggcgacgtcaccgcgaagctccagctcgcgcacgtc
gccgaggcccagggcgtcgtcgcggccgagaccatcgcgaacgcggagaccatgacgctc
ggcgactaccgcatgatgccgcgcgccacgttctgcaacccgcaggtcgcctcgttcggc
ctcaccgagcagcaggcgcgcgacgcgggctatgacgtgaaggtcgcgaagttcccgttc
tccgccaacggcaaggcgaacggcctgggcgagcccgtcggcttcgtcaaggtcatcgcg
gacggcgagcacctcgagctcctcggcgcgcacatgatcggccccgacgtctcggagctt
ctccccgagctcacgctcgcgcagaagtgggacctcaccgccctcgaggccgcgcgcaac
gtgcacacccacccgacgctgtcggaggccgtccaggaggcgttccacggcctggcaggg
cacatgatcaacctctaa

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