Microbacterium rhizosphaerae: SM116_07710
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Entry
SM116_07710 CDS
T09585
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00010
Glycolysis / Gluconeogenesis
mrg00020
Citrate cycle (TCA cycle)
mrg00260
Glycine, serine and threonine metabolism
mrg00280
Valine, leucine and isoleucine degradation
mrg00310
Lysine degradation
mrg00380
Tryptophan metabolism
mrg00620
Pyruvate metabolism
mrg00630
Glyoxylate and dicarboxylate metabolism
mrg00640
Propanoate metabolism
mrg00670
One carbon pool by folate
mrg00785
Lipoic acid metabolism
mrg01100
Metabolic pathways
mrg01110
Biosynthesis of secondary metabolites
mrg01120
Microbial metabolism in diverse environments
mrg01200
Carbon metabolism
mrg01210
2-Oxocarboxylic acid metabolism
mrg01240
Biosynthesis of cofactors
Module
mrg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mrg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mrg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
mrg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SM116_07710 (lpdA)
00020 Citrate cycle (TCA cycle)
SM116_07710 (lpdA)
00620 Pyruvate metabolism
SM116_07710 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
SM116_07710 (lpdA)
00640 Propanoate metabolism
SM116_07710 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SM116_07710 (lpdA)
00280 Valine, leucine and isoleucine degradation
SM116_07710 (lpdA)
00310 Lysine degradation
SM116_07710 (lpdA)
00380 Tryptophan metabolism
SM116_07710 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SM116_07710 (lpdA)
00670 One carbon pool by folate
SM116_07710 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrg04147
]
SM116_07710 (lpdA)
Enzymes [BR:
mrg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SM116_07710 (lpdA)
Exosome [BR:
mrg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SM116_07710 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_3
NAD_binding_8
FAD_binding_2
HI0933_like
GIDA
DAO
Thi4
FAD_oxidored
3HCDH_N
Lys_Orn_oxgnase
Lycopene_cycl
Amino_oxidase
2-Hacid_dh_C
ThiF
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
WPR91161
LinkDB
All DBs
Position
complement(1761554..1762951)
Genome browser
AA seq
465 aa
AA seq
DB search
MPHYDVVILGAGPGGYVAAVRSAQLGLSVAVIEEKYWGGVCLNVGCIPSKALLKNADLAH
TFHAKADLFGISGDVHFDFGVAHDRSRKVSETHVKGIHFLMKKNKVTEYDGRGTFVDAHT
IDVAKNDGTSERVTFTNAIISTGSTVRLLPGVQLSENVVTYEEQILTRELPDSIVIVGAG
AIGMEFAYILSNYGVTCTIIEFLPRALPNEDEEVSKEITRQYKKLGVEILTSTKVESVTD
HGDRVTVAYTAQDGTAGQIDADKVLMSIGFAPNVEGFGLENTGVKLTERGAIDIDDHMRT
NVEGIYAIGDVTAKLQLAHVAEAQGVVAAETIANAETMTLGDYRMMPRATFCNPQVASFG
LTEQQARDAGYDVKVAKFPFSANGKANGLGEPVGFVKVIADGEHLELLGAHMIGPDVSEL
LPELTLAQKWDLTALEAARNVHTHPTLSEAVQEAFHGLAGHMINL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcctcactacgacgtcgtcatcctcggcgcgggccccggcggttacgtcgcggccgtg
cgcagcgcacagctcggcctctcggtcgccgtcatcgaagagaagtactggggcggcgtc
tgcctcaacgtcggctgcatcccctcgaaggcgctgctgaagaacgcggacctcgcccac
acgttccatgcgaaggccgatctgttcggcatctcgggcgacgtgcacttcgacttcggc
gtcgcacacgaccgcagccgcaaggtgtccgagacgcacgtcaagggcatccacttcctc
atgaagaagaacaaggtgaccgagtacgacgggcgcggcacgttcgtcgacgcgcacacg
atcgatgtcgccaagaacgacggcacctccgagcgcgtcaccttcacgaacgcgatcatc
tccacgggctcgaccgtgcgtctcctccccggcgtgcagctcagcgagaacgtcgtcacg
tacgaggagcagatcctcacgcgcgagctccccgactcgatcgtcatcgtcggcgccggc
gcgatcgggatggagttcgcctacatcctcagcaactacggcgtgacgtgcacgatcatc
gagttcctcccccgcgccctcccgaacgaggacgaggaggtctcgaaggagatcacccgc
cagtacaagaagctcggcgtcgagatcctcacctcgaccaaggtggagtcggtcaccgac
cacggcgaccgcgtcaccgtcgcgtacaccgcgcaggacggcacggcgggccagatcgac
gccgacaaggtgctcatgtcgatcggcttcgcaccgaacgtcgagggcttcggcctggag
aacacgggcgtcaagctcaccgagcgcggcgcgatcgacatcgacgaccacatgcgcacg
aacgtcgagggcatctacgccatcggcgacgtcaccgcgaagctccagctcgcgcacgtc
gccgaggcccagggcgtcgtcgcggccgagaccatcgcgaacgcggagaccatgacgctc
ggcgactaccgcatgatgccgcgcgccacgttctgcaacccgcaggtcgcctcgttcggc
ctcaccgagcagcaggcgcgcgacgcgggctatgacgtgaaggtcgcgaagttcccgttc
tccgccaacggcaaggcgaacggcctgggcgagcccgtcggcttcgtcaaggtcatcgcg
gacggcgagcacctcgagctcctcggcgcgcacatgatcggccccgacgtctcggagctt
ctccccgagctcacgctcgcgcagaagtgggacctcaccgccctcgaggccgcgcgcaac
gtgcacacccacccgacgctgtcggaggccgtccaggaggcgttccacggcctggcaggg
cacatgatcaacctctaa
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