Microbacterium rhizosphaerae: SM116_07785
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Entry
SM116_07785 CDS
T09585
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
mrg
Microbacterium rhizosphaerae
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Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
HTH_28
HTH_7
HTH_23
HTH_Tnp_1
SLT_3
Motif
Other DBs
NCBI-ProteinID:
WPR91176
LinkDB
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Position
complement(1779988..1781160)
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AA seq
390 aa
AA seq
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MWNPIRAAVAVPTTIAGSLALTLSALPAHAAPVERAVQPHTDVAVRLAAHPVTTARAAAA
AVPATCTVKQGDTVSAIARRYGLNTASLLSWNGLGWNSVIQPGRVLRLSAPGAAPAAAPP
ASSPSPASAAYTIAQGDTISRIARAFGVSVAAVLQANGLSASSIIYPGQRLTIPGRMVPA
AAQAPVAQAPLAQAPVAQAPTRAPAATTWTVRTGDTVTGIANRFGVTVAAVLTANGLSRS
SIIYPGQRLAIPSPTGLTTEQIANAKLIIRVGRQLGVSDRGITIALGTAMQESSLRNLAH
GDRDSVGLFQQRPSYGWGTPAQIADAERSTRVFYGGPRDPNGSTTRGLLDVPGWQSMTFT
QAAQAVQNSAYPDAYAPWEAPAARWLAALG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
gtgtggaatccgattcgcgccgccgtggcggtgccgaccacgatcgccggctcgctggcg
ctcaccttgagcgcgctgcctgcgcatgccgctcccgtcgagcgggccgtacagcctcac
accgacgtcgccgtgcggctcgccgcccacccggtgacgacggcgcgtgcggccgcggcc
gccgttcctgcgacctgtaccgtgaagcagggcgacaccgtgagcgcgatcgcgcgcagg
tacgggctgaacacggcgagcctgctgtcgtggaacgggctcggctggaacagcgtcatc
cagcccggccgtgtcctgcggctctcggccccaggggccgcgccggccgccgcgccgccg
gcatcgtcgccgtcccccgcatccgccgcctacacgatcgcccagggcgacacgatctcc
cgcatcgcgcgggcgttcggtgtcagcgtcgccgccgtgctgcaggcgaacggcctctcg
gcgtcgtcgatcatctaccccggacagcgcctcaccatcccgggccgcatggtgcccgcc
gccgcacaggccccggtggcacaggccccgctggcacaggccccggtggcacaggcgccc
acgcgcgcccctgcggcgaccacgtggacggtccgcaccggcgacaccgtcacgggcatc
gcgaaccggttcggagtgaccgtcgccgcggtgctcacggccaacggcctctcccgctcg
tcgatcatctatcccgggcagcgtctggcgatcccgagccccacgggcctgaccaccgag
cagatcgcgaacgcgaagctcatcatcagagtcggccgccagctgggagtgtccgatcgc
ggcatcacgatcgccctcggcaccgcgatgcaggagtcctccctccgcaacctcgcccac
ggcgaccgcgactcggtcggcctgttccagcagcgtccgagctacggatggggcactcct
gcccagatcgcggatgccgagcgctcgacgcgcgtcttctacgggggtccccgcgacccg
aacggcagcacgacccgcggcctgctcgacgtcccgggctggcagtcgatgacgttcacg
caggccgcccaggcggtgcagaactccgcctaccccgacgcctacgcgccgtgggaggct
cccgccgcccgctggctcgccgctctcgggtga
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