Microbacterium rhizosphaerae: SM116_08035
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Entry
SM116_08035 CDS
T09585
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00061
Fatty acid biosynthesis
mrg00071
Fatty acid degradation
mrg01100
Metabolic pathways
mrg01212
Fatty acid metabolism
mrg02024
Quorum sensing
mrg04146
Peroxisome
Module
mrg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SM116_08035
00071 Fatty acid degradation
SM116_08035
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SM116_08035
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM116_08035
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mrg01004
]
SM116_08035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrg04147
]
SM116_08035
Enzymes [BR:
mrg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SM116_08035
Lipid biosynthesis proteins [BR:
mrg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SM116_08035
Exosome [BR:
mrg04147
]
Exosomal proteins
Exosomal proteins of breast milk
SM116_08035
Exosomal proteins of breast cancer cells
SM116_08035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WPR91222
LinkDB
All DBs
Position
complement(1831358..1833061)
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AA seq
567 aa
AA seq
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MTDYDPPRPWIASYADGVPADLEPVSGSLIDIVAASVRDYPDAPALQFFGAETTYRRMQE
QIDRAAAGLRALGVGHGDTVAIVLPNCPQHIVAFYAILRLGAIVIEHNPLYTPRELRKQF
EDHGAKTAIVWSKVVKSVQDFPADLAVTNLISVDVTTAMPFGTRLALRLPIAKARESRAA
LHERVSGTVEWETLLRSDPLPATHPKPATDDLAIIQYTSGTTGTPKGAALTHRNLLSNAA
QARAWVPQIVRGNGCVVYAVLPMFHAYGLTLCLTFAMSMGARLVLFPRFDPDMVLAVTKK
HPATFLPLVPPIAERLLRAAQEQGVSLRGTEVAISGAMALPHELVVPFEAATGGYLVEGY
GLSECSPVLMANPVADNRVPGTVGLPLPGTECRVVDPDEPTKDVAPGAPGELVVRGPQVF
GGYYGKPEETEASFTDGWYRTGDIVTIDEAGFVRIVDRIKELIITGGFNVAPTEVENVLR
QHPDVEDAAVVGLPSERSGEEVVAAVVLAPGVGEPDVEAIRAFARSILTPYKVPRRIFVV
DELPTSLIGKVLRRQVRESLLQLTTGS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgactacgacccgccccggccatggatcgccagctacgccgacggcgtccccgcc
gacctggagcccgtctccggctcgctcatcgacatcgtcgccgcatccgtccgcgactat
ccggatgcgccggccctgcagttcttcggcgccgagacgacataccgccgcatgcaggag
cagatcgaccgggccgcagcgggactgcgcgctctcggcgtcggccatggcgacacggtc
gcgatcgtgctgcccaactgcccgcagcacatcgtcgcgttctacgcgatcctgcgcctc
ggcgccatcgtgatcgagcacaatccgctctacactccgcgcgagctgcgcaagcagttc
gaggaccacggcgccaagaccgcgatcgtctggagcaaggtcgtcaagtccgtccaggac
ttccccgcggatctcgccgtcactaacctcatctcggtcgacgtcaccacggcgatgccg
ttcggcacgcgcctggccctgcgcctgccgatcgccaaggcgcgcgagtcgcgggcggca
ctccacgagagggtctcgggaacggtcgaatgggagacgctgctccgctccgacccgctg
ccggcgacgcatccgaagcccgccaccgacgacctcgcgatcatccagtacacgagcggc
acgacgggaaccccgaagggcgcggcgctcacccaccggaacctgctctccaacgccgcg
caggcacgcgcgtgggttccccagatcgtgcggggcaacggatgcgtcgtctacgcggtc
ctgccgatgttccacgcctacggactcaccctgtgcctgacgttcgcaatgtcgatgggt
gcgcggctcgtgctcttcccgcggttcgatccggacatggtccttgccgtgaccaagaag
catccggcgaccttcctccccctggtgccgccgatcgccgagcgcctcctccgggctgcg
caggagcagggcgtgtcgctgcggggcaccgaggtcgcgatctcgggtgccatggcgctg
ccgcatgagctcgtcgtcccgttcgaagccgccaccggcggctacctcgtcgagggctac
ggcctctccgagtgctcgccggttctgatggccaacccggtggctgacaaccgggtgccg
ggcaccgtcggcctgccgctgcccggcacggagtgccgggtcgtcgaccccgacgagccg
acgaaggatgtcgcacccggcgcccccggcgaactcgtggtgcgcggaccgcaggttttc
ggcggctactacggcaagccggaggagaccgaggcctcgttcacggacggctggtaccgc
accggcgacatcgtgacgatcgacgaggccggtttcgtccggatcgtcgaccgtatcaag
gagctcatcatcacgggcggcttcaacgtcgcgccgaccgaggtcgagaacgtcttgcgc
cagcatccggatgtcgaggatgccgcggtcgtgggcttgccgagcgagcgctccggcgag
gaggtcgtcgcggccgtggtcctcgcccccggcgtcggcgaacccgacgtcgaggcgatc
cgcgccttcgcccgcagcatcctgaccccgtacaaggtgccgcgccgcatcttcgtcgtc
gacgagctgccgacctcgctcatcggcaaggtgctgcgccgccaggtgcgggaatcactg
ctgcagctgaccaccggctcctga
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