Microbacterium rhizosphaerae: SM116_08105
Help
Entry
SM116_08105 CDS
T09585
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SM116_08105 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_08105 (orn)
03009 Ribosome biogenesis [BR:
mrg03009
]
SM116_08105 (orn)
Messenger RNA biogenesis [BR:
mrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SM116_08105 (orn)
Ribosome biogenesis [BR:
mrg03009
]
Eukaryotic type
Pre-60S particles
RNases
SM116_08105 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WPR91235
UniProt:
A0ABZ0SSV1
LinkDB
All DBs
Position
complement(1845880..1846506)
Genome browser
AA seq
208 aa
AA seq
DB search
MVGTSENDRLVWIDCEMTGLDPEIDELVEIAVIVTDFELRPLDDGFQIVIKPDASALANM
SDFVTNMHRTSGLLDEIPHGVTTADAEFQVLEYIQRFVVTEGKAPLAGNTIGTDRMFLAK
YMPRVDRWLHYRNIDVSSVKELSRRWFPRAYIHAPVKEGGHRALADIRESIRELAYYRQA
VFVPQPGPTSETARAAADAAVSSYAPQM
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaacctccgagaacgaccggctcgtctggatcgactgcgagatgacgggcctc
gatccggagatcgacgagctcgtggagatcgcggtcatcgtgacggacttcgagctgaga
cctctcgatgacggcttccagatcgtgatcaagcccgatgcctcggcactcgcgaacatg
agcgacttcgtcacgaacatgcaccgcacctcgggactcctcgacgagatcccgcacggc
gtcacgacagcggatgccgagttccaggtgctcgagtacatccagcgcttcgtcgtcacc
gagggcaaggccccgctggccggcaacaccatcgggacggaccgcatgttcctcgcgaag
tacatgccccgcgtcgaccggtggctgcactatcgcaacatcgatgtgtcgagcgtcaag
gagctctcccgccggtggttcccgcgcgcgtacatccacgcgccggtcaaggagggcggc
caccgcgccctcgccgacatccgcgaatccatccgcgagctcgcgtattaccgccaggcg
gtgttcgtcccgcagcccgggccgacgagcgaaacggcacgcgctgccgccgatgcggcg
gtgtcgtcgtacgctccgcagatgtga
DBGET
integrated database retrieval system
