Microbacterium rhizosphaerae: SM116_08585
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Entry
SM116_08585 CDS
T09585
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03420
Nucleotide excision repair
mrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SM116_08585
03430 Mismatch repair
SM116_08585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_08585
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM116_08585
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM116_08585
MMR (mismatch excision repair)
Other MMR factors
SM116_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_11
AAA_30
UvrD_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WPR91316
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All DBs
Position
complement(1943456..1945144)
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AA seq
562 aa
AA seq
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MSLEPTALQLQVRDTPDLGLLVVAPAGCGKSEALALRVQGMIRRGVAAGPRRILVATFSN
RAKDNIRERLRSYLTAAELRDKVTVINFHGLAARLYRSHAAAIGLDPGWELPENDWVKEQ
CQRMGLIYGQISAVDKALRQAKQDMVDDDEVMRRLEAVGNRDAIEVERLRIKDQQLTYDD
LPRMAELILANDAVAGLYSAHFAAVAVDEFQDLTPQQLRMINRIGAGRTTYAGDLAQGIY
GFTGAKPEEIHAAIVDEVATVIELTESHRSSPAVLAAVNALTPLTLGSELTCAAPNTWPS
GGIAAEVHHQSADSEAEWLVKAAKAILSRAPGQRIGVISRIGSRRRFADAALAAEPGFEV
HRWDDGVLDTETARRVRSTLANVDSAAVLTSKDPIEALRDLADFHELQDPADRLALADAL
GWVLELLTQGLAPTDIAKRVRVGDNSTLLTRPGVHLLSGHAGKGQQFDWVFAIGVEDGNV
PFFEAKTPEALLEEARVLSVIMSRARHGLVLSHATAVPALSGTVWSKDPSRFLTAELRAQ
LTDAAGLVEWFKAADWVAVAGR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtgagccttgagcccaccgctctccagctgcaggttcgcgacacccctgatctcggcctg
cttgtcgtggcacccgccgggtgcgggaagagcgaggcgctcgctctccgggttcagggc
atgattcgtcgtggtgtcgccgccggcccgcgtcgcattcttgtcgcgaccttctcaaac
cgcgcaaaggacaacattcgcgagcgcctccgcagttatctgactgcggccgagctccgc
gacaaggtcaccgtgatcaacttccacggattggccgcgcgtctctaccgctcccatgcc
gcggcgatcggactcgaccccgggtgggagcttccggagaacgattgggttaaggagcag
tgccagcgtatggggctgatctatggccagatctcggccgtcgacaaggcgcttcgccag
gcgaagcaggacatggtcgatgacgacgaggtgatgcggcgccttgaggctgtaggcaac
cgggatgcgatcgaggtggaacgtctccgcatcaaggaccagcaactgacctacgacgac
ctccctcggatggccgagctgatcctggccaacgacgcggtcgccggtctgtacagcgcc
cacttcgcggctgtcgcggtggacgagttccaggacctcactccgcagcagctccgcatg
atcaatcgaatcggggctggtcgcaccacgtatgcgggcgacctcgcccaaggcatctac
ggattcaccggtgcaaagccggaggagattcatgccgcgatcgtggacgaggtcgccacg
gtgattgagctgaccgagtcgcaccgctcctcgcccgcggtgcttgcggctgtcaacgcg
ctcaccccactcactctcggctccgaactcacgtgtgctgcgccgaatacctggccttct
ggcgggatcgccgccgaagttcaccaccaatctgcggacagcgaggccgagtggcttgtg
aaggcagcgaaggcgatcctgtcgcgcgcacccggtcagcggatcggtgtgatctctcgt
atcggctcccgccggcgattcgccgatgctgctctcgctgcggagccagggttcgaggtg
catcgctgggacgacggcgtcctcgacaccgagacggctcgtcgcgttcggtccacgctt
gcgaacgtcgacagcgcagcggtgctcacgtcgaaggatcccattgaagctctgcgcgac
ctggccgacttccacgagctccaggatcctgccgaccgactcgcgctcgctgatgcgctt
ggctgggtgctggaacttctcactcaggggctcgctcccactgatatcgccaagcgagtt
cgggttggcgacaactccactctgctcacccgtcccggcgttcaccttctctctgggcac
gctggcaagggccagcagttcgattgggtgttcgcgatcggtgtcgaggacggtaatgtg
ccgttcttcgaggcgaagactccggaggccctcctcgaagaggcgcgggtgctctccgtc
attatgtcccgtgcccgtcacggtctggtgctgagtcacgcgactgccgttcccgcgctg
agcggcaccgtctggtcgaaggatccgtcgcggttcctcacggcagaacttcgggcccag
ctcacggatgccgcgggtttggttgagtggttcaaggccgcagattgggtggccgtcgca
ggccgctga
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