Microbacterium rhizosphaerae: SM116_09800
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Entry
SM116_09800 CDS
T09585
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03030
DNA replication
mrg03410
Base excision repair
mrg03420
Nucleotide excision repair
mrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM116_09800 (polA)
03410 Base excision repair
SM116_09800 (polA)
03420 Nucleotide excision repair
SM116_09800 (polA)
03440 Homologous recombination
SM116_09800 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrg03032
]
SM116_09800 (polA)
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_09800 (polA)
Enzymes [BR:
mrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SM116_09800 (polA)
DNA replication proteins [BR:
mrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SM116_09800 (polA)
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SM116_09800 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM116_09800 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WPR88078
UniProt:
A0ABZ0SHY1
LinkDB
All DBs
Position
2207005..2209638
Genome browser
AA seq
877 aa
AA seq
DB search
MTDSAKPTLLVVDGHSLAYRAFYALPVENFSTKDGQHTNGIYGFLSMLVNLIKAERPTHM
AVAFDTSRVSFRTEQYPEYKANRSETPAEFRGQIPILQDCLAAMSIPVLLKEGVEADDIL
ATLATQGVAQGFDVLVCSGDRDTIQLVTDEVTLLYPNVQGVSQLKRYDPAAVRERYGVEP
AQYPEIAALVGETSDNLPGVPKVGEKTAVKWLTQYGSLETLLDNADKITGVVGGNLREHL
EDVRRNRALNRLVRDVELPMGPADLEVKPIDAVAVRDIFSRLEFRTLLPRVFEAAGESAD
AAVAQPSQAAPAVAELDAAELAAWLGAAEGDVGVTLTIAGGLPTRIGFATRDAAAEASWM
PEVAASIAPWLASDAPKVFADAKPQLKALARAGAEVGGISYDVSLAGWLMRPSFPDKTLG
DLVDRYLHEKLPEADPNQLVPETEGATPAQLSWYTLRVADALRAELPARVTGVLETIELP
TLRTLADMELAGVAVSHEKLSAFSAELGARADAVAVEAYATIGREVNLGSPKQLQEVLFD
QLALPKTRKTKTGYSTDSTALIDLQETNPHPFLEQLSQHREATKLRQIIESLDAAIGADG
RIHTTYVQTGSQTGRLSSTDPNLQNIPIRTDESGRIRAAFEVGEGYETLLTADYSQIEMR
IMAHLSGDPGLIEAFNSGEDLHRFVGARVFGVEPSQVTPAMRTKVKAMSYGLVYGLSAFG
LSKQLRIEQSEAKQLMMEYFARFGAVRDYLRSSVETARIEGYTETIFGRRRPFPDLTSPN
RVLRENAERAALNAPIQGSAADIMKIALFRIHDEFRAASLSSRVLLQIHDELVVEVAPGE
WDAAAAIVKDRMGDAAELSVPLDVQIGRGADWNEAGH
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgcaaagcctaccctgctcgtcgtcgacggtcattcgctcgcgtaccgg
gcgttctacgccctgcccgtcgagaacttctcgacgaaagacggccagcacacgaacggc
atctacggattcctctcgatgctcgtgaacctcatcaaggccgagcgaccgacgcacatg
gccgtcgccttcgacacgtcgcgcgtctccttccgcaccgagcagtacccggagtacaag
gcgaaccgctccgagacgccggcggaattccgcgggcagatccccatcctgcaggactgc
ctcgccgcgatgagcatcccggtcctcctgaaagagggcgtcgaggccgatgacatcctg
gcgacgctcgcgacgcagggcgtcgcacagggcttcgacgtgctcgtgtgctccggcgac
cgcgacaccatccagctcgtcaccgacgaggtcacgctgctgtacccgaacgtgcagggt
gtgtcccagctgaagcgatacgaccccgcggcggtgcgcgagcggtacggcgtggagccg
gcgcaatatcccgagatcgcggcgctcgtcggcgagacgagcgacaatctgccgggcgtg
ccgaaggtcggcgagaagaccgctgtcaagtggctcacccagtacggctcgctcgagaca
ctgctcgacaacgccgacaagatcaccggcgtcgtgggcggcaacctccgcgagcacctc
gaggacgtccggcgcaaccgggcgctcaaccgactggtgcgcgacgtcgagcttccgatg
gggccggccgacctcgaggtcaagccgatcgacgccgtcgccgtgcgcgacatcttctcg
cggctcgagttccgcacgctgctgcccagagtgttcgaggctgcgggggagtccgccgac
gccgccgtcgcacagccgtcgcaggcggcgcccgccgtcgccgaactcgacgccgccgag
cttgccgcgtggctgggggccgccgagggagacgtcggcgtcacgctcacgatcgcgggc
ggccttccgacgcgcatcggattcgcgacgcgggatgccgcggccgaggcgagctggatg
ccggaggtggcggcatccatcgccccctggctggcatccgacgcgcccaaggtgttcgcg
gacgcgaaaccgcagctgaaggcgctggcgcgcgcgggggccgaggtgggcggcatctcc
tacgacgtgtccctcgcgggctggctcatgcgcccgagcttcccggacaagaccctcggc
gatctcgtcgaccgctacctgcacgagaagcttccggaggccgaccccaaccagctggtg
cccgagaccgagggcgccacgcccgctcagctctcctggtacacgctccgggtcgccgac
gcgctgcgggcagagctgccggcgcgcgtcacgggggtgctcgagacgatcgagcttccg
actctgcgcacactcgccgacatggagctcgcgggcgtcgccgtatcgcacgagaagctg
agtgcgttctccgcggaactcggcgcgcgcgccgacgcggtggccgtcgaggcgtacgcc
acgatcggccgtgaggtgaacctcggctcgccgaagcagctgcaggaggtgctgttcgac
cagctcgcgctgccgaagacgcgcaagacgaagaccggctactccacggactcgaccgcg
ctcatcgatctgcaggagacgaacccgcatccgttcctcgagcagctgtcgcagcaccgc
gaggcgacgaagctccgccagatcatcgaatcgctggatgcggcgatcggcgccgacggc
cggatccacacgacctatgtgcagaccggcagccagaccggacgcctgtcgagcaccgac
cccaacctccagaacatcccgatccgcacggacgagagcgggcgcatccgggcagccttc
gaggtcggcgaaggatacgagacgctcctgacggcggactactcgcagatcgagatgcgc
atcatggcgcacctctccggcgacccggggctgatcgaggcgttcaactcgggggaggac
ctgcaccgcttcgtcggcgctcgggtgttcggcgtcgagccgtcccaggtcacgcccgcg
atgcgcaccaaggtcaaggcgatgtcgtacgggctcgtctacggcctctccgcgttcggg
ctgtcgaagcagctgcgcatcgagcagtccgaggcgaagcagctcatgatggagtatttc
gcgcgcttcggcgcggtccgcgactatctccgctcatcggtggagaccgcgcgcatcgag
ggctacaccgagacgatcttcggccgacgccgcccgttccccgacctgacgagccccaac
cgggtgctccgcgagaacgccgaacgtgccgcgctgaacgccccgatccaggggagtgcg
gccgacatcatgaagatcgcgctgttccgcatccatgacgagttccgtgcggcatcgctc
tcgtcgcgggtcctcctgcagatccacgacgagctcgtcgtcgaagtcgcgccgggggag
tgggatgcggcggcggccatcgtgaaggaccggatgggcgatgccgccgagctgtcggtg
ccgctcgacgtgcagatcggccgcggtgccgactggaacgaggccggccactga
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