KEGG   Microbacterium rhizosphaerae: SM116_09800
Entry
SM116_09800       CDS       T09585                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
mrg  Microbacterium rhizosphaerae
Pathway
mrg03030  DNA replication
mrg03410  Base excision repair
mrg03420  Nucleotide excision repair
mrg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mrg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SM116_09800 (polA)
   03410 Base excision repair
    SM116_09800 (polA)
   03420 Nucleotide excision repair
    SM116_09800 (polA)
   03440 Homologous recombination
    SM116_09800 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrg03032]
    SM116_09800 (polA)
   03400 DNA repair and recombination proteins [BR:mrg03400]
    SM116_09800 (polA)
Enzymes [BR:mrg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SM116_09800 (polA)
DNA replication proteins [BR:mrg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SM116_09800 (polA)
DNA repair and recombination proteins [BR:mrg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     SM116_09800 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SM116_09800 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_2
Other DBs
NCBI-ProteinID: WPR88078
UniProt: A0ABZ0SHY1
LinkDB
Position
2207005..2209638
AA seq 877 aa
MTDSAKPTLLVVDGHSLAYRAFYALPVENFSTKDGQHTNGIYGFLSMLVNLIKAERPTHM
AVAFDTSRVSFRTEQYPEYKANRSETPAEFRGQIPILQDCLAAMSIPVLLKEGVEADDIL
ATLATQGVAQGFDVLVCSGDRDTIQLVTDEVTLLYPNVQGVSQLKRYDPAAVRERYGVEP
AQYPEIAALVGETSDNLPGVPKVGEKTAVKWLTQYGSLETLLDNADKITGVVGGNLREHL
EDVRRNRALNRLVRDVELPMGPADLEVKPIDAVAVRDIFSRLEFRTLLPRVFEAAGESAD
AAVAQPSQAAPAVAELDAAELAAWLGAAEGDVGVTLTIAGGLPTRIGFATRDAAAEASWM
PEVAASIAPWLASDAPKVFADAKPQLKALARAGAEVGGISYDVSLAGWLMRPSFPDKTLG
DLVDRYLHEKLPEADPNQLVPETEGATPAQLSWYTLRVADALRAELPARVTGVLETIELP
TLRTLADMELAGVAVSHEKLSAFSAELGARADAVAVEAYATIGREVNLGSPKQLQEVLFD
QLALPKTRKTKTGYSTDSTALIDLQETNPHPFLEQLSQHREATKLRQIIESLDAAIGADG
RIHTTYVQTGSQTGRLSSTDPNLQNIPIRTDESGRIRAAFEVGEGYETLLTADYSQIEMR
IMAHLSGDPGLIEAFNSGEDLHRFVGARVFGVEPSQVTPAMRTKVKAMSYGLVYGLSAFG
LSKQLRIEQSEAKQLMMEYFARFGAVRDYLRSSVETARIEGYTETIFGRRRPFPDLTSPN
RVLRENAERAALNAPIQGSAADIMKIALFRIHDEFRAASLSSRVLLQIHDELVVEVAPGE
WDAAAAIVKDRMGDAAELSVPLDVQIGRGADWNEAGH
NT seq 2634 nt   +upstreamnt  +downstreamnt
gtgacggactccgcaaagcctaccctgctcgtcgtcgacggtcattcgctcgcgtaccgg
gcgttctacgccctgcccgtcgagaacttctcgacgaaagacggccagcacacgaacggc
atctacggattcctctcgatgctcgtgaacctcatcaaggccgagcgaccgacgcacatg
gccgtcgccttcgacacgtcgcgcgtctccttccgcaccgagcagtacccggagtacaag
gcgaaccgctccgagacgccggcggaattccgcgggcagatccccatcctgcaggactgc
ctcgccgcgatgagcatcccggtcctcctgaaagagggcgtcgaggccgatgacatcctg
gcgacgctcgcgacgcagggcgtcgcacagggcttcgacgtgctcgtgtgctccggcgac
cgcgacaccatccagctcgtcaccgacgaggtcacgctgctgtacccgaacgtgcagggt
gtgtcccagctgaagcgatacgaccccgcggcggtgcgcgagcggtacggcgtggagccg
gcgcaatatcccgagatcgcggcgctcgtcggcgagacgagcgacaatctgccgggcgtg
ccgaaggtcggcgagaagaccgctgtcaagtggctcacccagtacggctcgctcgagaca
ctgctcgacaacgccgacaagatcaccggcgtcgtgggcggcaacctccgcgagcacctc
gaggacgtccggcgcaaccgggcgctcaaccgactggtgcgcgacgtcgagcttccgatg
gggccggccgacctcgaggtcaagccgatcgacgccgtcgccgtgcgcgacatcttctcg
cggctcgagttccgcacgctgctgcccagagtgttcgaggctgcgggggagtccgccgac
gccgccgtcgcacagccgtcgcaggcggcgcccgccgtcgccgaactcgacgccgccgag
cttgccgcgtggctgggggccgccgagggagacgtcggcgtcacgctcacgatcgcgggc
ggccttccgacgcgcatcggattcgcgacgcgggatgccgcggccgaggcgagctggatg
ccggaggtggcggcatccatcgccccctggctggcatccgacgcgcccaaggtgttcgcg
gacgcgaaaccgcagctgaaggcgctggcgcgcgcgggggccgaggtgggcggcatctcc
tacgacgtgtccctcgcgggctggctcatgcgcccgagcttcccggacaagaccctcggc
gatctcgtcgaccgctacctgcacgagaagcttccggaggccgaccccaaccagctggtg
cccgagaccgagggcgccacgcccgctcagctctcctggtacacgctccgggtcgccgac
gcgctgcgggcagagctgccggcgcgcgtcacgggggtgctcgagacgatcgagcttccg
actctgcgcacactcgccgacatggagctcgcgggcgtcgccgtatcgcacgagaagctg
agtgcgttctccgcggaactcggcgcgcgcgccgacgcggtggccgtcgaggcgtacgcc
acgatcggccgtgaggtgaacctcggctcgccgaagcagctgcaggaggtgctgttcgac
cagctcgcgctgccgaagacgcgcaagacgaagaccggctactccacggactcgaccgcg
ctcatcgatctgcaggagacgaacccgcatccgttcctcgagcagctgtcgcagcaccgc
gaggcgacgaagctccgccagatcatcgaatcgctggatgcggcgatcggcgccgacggc
cggatccacacgacctatgtgcagaccggcagccagaccggacgcctgtcgagcaccgac
cccaacctccagaacatcccgatccgcacggacgagagcgggcgcatccgggcagccttc
gaggtcggcgaaggatacgagacgctcctgacggcggactactcgcagatcgagatgcgc
atcatggcgcacctctccggcgacccggggctgatcgaggcgttcaactcgggggaggac
ctgcaccgcttcgtcggcgctcgggtgttcggcgtcgagccgtcccaggtcacgcccgcg
atgcgcaccaaggtcaaggcgatgtcgtacgggctcgtctacggcctctccgcgttcggg
ctgtcgaagcagctgcgcatcgagcagtccgaggcgaagcagctcatgatggagtatttc
gcgcgcttcggcgcggtccgcgactatctccgctcatcggtggagaccgcgcgcatcgag
ggctacaccgagacgatcttcggccgacgccgcccgttccccgacctgacgagccccaac
cgggtgctccgcgagaacgccgaacgtgccgcgctgaacgccccgatccaggggagtgcg
gccgacatcatgaagatcgcgctgttccgcatccatgacgagttccgtgcggcatcgctc
tcgtcgcgggtcctcctgcagatccacgacgagctcgtcgtcgaagtcgcgccgggggag
tgggatgcggcggcggccatcgtgaaggaccggatgggcgatgccgccgagctgtcggtg
ccgctcgacgtgcagatcggccgcggtgccgactggaacgaggccggccactga

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