Microbacterium rhizosphaerae: SM116_09915
Help
Entry
SM116_09915 CDS
T09585
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_09915
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SM116_09915
Messenger RNA biogenesis [BR:
mrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SM116_09915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
DEXQc_Suv3
MTR4_beta-barrel
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WPR88101
UniProt:
A0ABZ0SIW7
LinkDB
All DBs
Position
complement(2230466..2232943)
Genome browser
AA seq
825 aa
AA seq
DB search
MSSPSERYEQARAAAAHPLATAFADSQRFSLDPFQIEACRALEEGRSVLVAAPTGAGKTI
VGEFAIHLAMRESDEKAFYTTPIKALSNQKFRELVDVYGPDDVGLLTGDTNINGNARIVV
MTTEVLRNMLYADSPALRGLRFVVMDEVHYLADRFRGAVWEEVIIHLPSAVRLVSLSATV
SNAEEFGDWLDTVRGDTEVIVSETRPVPLEQHVLVRSDLLPLFDDRAGVATARVNQELMR
IRSFKGQTYESNRRAQASSSARHAGYEAVRRRPHKGGTRPVRSANVSRIERLDRPDVVEL
LNRANLLPAIFFIFSRMGCDAAVQQVRRAGLRLTTPEERAEIRAIVDERTRMMLDEDLAV
LGYWEWRENLERGVAAHHAGLLPAFKEVVEELFQRKLLKAVFATETLALGINMPARTVVL
EKLEKFNGEARVAITPGEYTQLTGRAGRRGIDVEGHAVIQWTEGLDPQAVAALASRRTYP
LNSSFRPTYNMAVNLIEQFGRPRARQILESSFAQFQADRAVVGLARQVREQEESLAGYAK
AMSCDRGDFAEYSGIRRELGDLEKINRKDANASRSTRDARHKQIATLRRRMQRHPCHSCP
DREDHARWAERYWKLRRTADRLRQQIETRTGTVARVFDRVVEVLGEVGYVEGTGAATRVT
ASGATMRRIYGERDLLVAESLRLGLWDRLDAASLAAIACCLVYEPRRDGDGPGANGLPRG
AFRAALTATQDLWQELDDLEREHRLPGSNPVATGLATAMHAWALGMPLDRVLIEADMAAG
DFVRWAKQTIDLLDQLSLVAQPALASTARTALDEVRHGIVAYSSV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
gtgagctccccctccgagcggtacgaacaggcccgtgcggccgcagcgcatccgctcgcc
acggcgttcgcggattcccagcgcttttcgctggatcctttccagatcgaggcctgccgt
gcactggaggagggccgcagcgtgctcgtcgctgccccgaccggcgcgggcaagaccatc
gtgggcgaattcgcgatccatctcgccatgcgcgagagcgatgagaaggcgttctacacg
accccgatcaaggcgctctcgaaccagaagttccgtgagctcgtcgacgtgtacgggccg
gacgacgtgggccttctcaccggcgacacgaacatcaacggcaacgcgcgcatcgtcgtc
atgacgacggaagtcctgcgcaacatgctgtacgcggactctcccgcgctgcgcgggctg
cgcttcgtcgtgatggatgaggtgcactacctcgccgaccgcttccgcggagccgtgtgg
gaggaggtcatcatccacctcccgtccgccgtccgcctggtgtctctgtcggccacggtc
tccaacgcggaggagttcggcgactggctcgacacggtacgcggcgacaccgaggtcatc
gtgtccgagacgcggccggttccgctcgaacagcatgttctggtgcgcagcgacctgctg
cccctgttcgacgaccgcgcgggcgtggccaccgcacgcgtcaaccaggaactgatgcgc
atccgctcgttcaagggccagacgtacgagagcaaccggcgcgcccaggcgtcgagcagt
gcacgccacgccggctatgaagcggtccgccgccgcccgcacaagggcggcacacggccg
gtgcgctcggcgaacgtgagccgcatcgagcggctcgaccgccccgacgtcgtcgagctg
ctgaaccgggcgaacctcctgcccgcgatcttcttcatcttcagccggatgggctgcgac
gccgcggtgcagcaagtgcgccgcgccgggctccgcctcacgacgccggaggagcgcgcc
gagatccgtgccatcgtcgacgagcgcacccgcatgatgctcgacgaggacctcgcggtc
ctcggctactgggaatggcgggagaacctcgagcgcggcgtcgccgcccatcacgcgggg
cttctgcccgcattcaaggaggtcgtcgaggagctcttccagcgcaagctcctgaaggcg
gtcttcgcgaccgagacgctcgccctcggcatcaacatgccggcacgcaccgtggtcctc
gagaagctggagaagttcaacggcgaggcgcgggtcgccatcacaccgggggagtacacg
cagctcaccggccgcgccgggcggcgcggcatcgacgtcgagggccacgccgtcatccag
tggaccgaaggcctcgacccgcaggcggtggcggccctcgcatcccgccgcacctacccg
ctgaactcgagcttccggccgacgtacaacatggcggtgaaccttatcgagcagttcggg
cgtccgcgggcacggcagatcctcgagtcgtcgttcgcgcagttccaagccgatcgcgcc
gtcgtcggcctcgcccgacaagtccgcgagcaggaggagtcgctcgccggctacgcgaag
gcgatgagctgcgatcgcggtgacttcgccgagtactcgggcatccgccgcgagctgggc
gatctggagaagatcaaccgcaaggacgcgaacgcctcccgctccacacgcgacgcccgg
cacaagcagatcgccacgctgcggcgacggatgcagcgccacccctgccactcctgtccc
gaccgcgaggaccatgcccgatgggccgagcggtactggaagctgcgccgcaccgccgat
cgcctgcgccagcagatcgagacccgtacgggcacggtcgcccgcgtcttcgaccgcgtg
gtcgaggtgctgggcgaggtcggctacgtcgagggcacgggagccgccacgcgggtcacg
gcgtcgggtgcgaccatgcgacggatctacggcgagcgcgacctgctcgtggccgagtcc
ctgcggctcggactctgggaccgattggatgccgcatccctcgccgcgatcgcctgctgc
ctcgtgtacgagccgcggcgggatggcgacggcccgggtgcgaacggccttccgcgcgga
gcgttccgtgccgcgctcacggccacgcaggacctctggcaggagctcgacgacctcgag
cgcgagcaccgcctcccgggctccaaccctgtcgcgacggggctcgcgaccgcgatgcat
gcgtgggcgctggggatgccgctggaccgggtgctcatcgaggccgacatggcggcgggg
gacttcgtacgctgggcgaagcagacgatcgacctgctcgaccagctctcgctcgtcgcg
caacccgcgctggcgtccaccgcgcgcacggcgctcgatgaggtgcggcacggcatcgtg
gcgtactcctcggtgtga
DBGET
integrated database retrieval system
