Microbacterium rhizosphaerae: SM116_10270
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Entry
SM116_10270 CDS
T09585
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_10270 (rapZ)
Messenger RNA biogenesis [BR:
mrg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SM116_10270 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
ABC_tran
MORF_dom
SKI
AAA_16
CoaE
IIGP
AAA_22
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
WPR88169
LinkDB
All DBs
Position
complement(2300592..2301461)
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AA seq
289 aa
AA seq
DB search
MTDAGEMLIVTGMSGAGRSTAANALEDLGWYVVDNLPPQMLKPLLELTQYAGSALPKVAV
VVDVRGGDLFTELPDVTRALRDARQQLRVVFLDASDDVLVRRFEAVRRPHPLQDEGTILD
GIRLEREWLAAIRESADVVIDTSAFNIHQLATTVVDMFSEQGAARHSLTIVSFGFKYGLP
PDADLVADMRFLPNPFWVEELRPLTGEDDAVRAYVLEAPGAQEFIDAYERALRPVLEGYQ
RENKRHSVLAIGCTGGKHRSVAVARELAQRLTTIPGVAVRVAHRDLGHE
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcgggggagatgctcatcgtcaccggcatgtccggcgcggggcgctcgacg
gcggcgaacgcgctcgaggacctcggctggtacgtcgtcgacaacctgcccccgcagatg
ctgaagccgctcctggagctcacgcagtacgcgggctcggcgctgccgaaggtcgctgtc
gtggtcgacgtgcgcgggggcgatctgttcaccgagctgcccgacgtcacgcgagccctc
cgcgatgcgcgccagcagctccgggtggtcttcctggatgcgtcggacgacgtcctcgtg
cgtcgcttcgaggctgtgcggcggccgcaccccctgcaggacgagggcacgatcctcgac
ggcatccgcctggagcgggagtggctcgcggccatccgcgagagcgcggacgtcgtcatc
gacacgtcggcgttcaacatccatcagctggcgacgacggtcgtcgacatgttctcggag
cagggcgccgcccggcactccctcacgatcgtgagcttcggcttcaagtacggcctgccg
ccggatgccgacctcgtggccgacatgcgcttcctgccgaacccgttctgggtcgaggag
ctgcgtcccctcaccggggaggacgacgccgtgcgcgcatacgtcctggaagcccccggc
gcccaggaattcatcgacgcctacgagcgggcgctccggcccgttctcgaggggtatcag
cgcgagaacaagcgccattcggtgctggcgatcggatgcaccggcggcaagcaccgctcg
gtcgcggtggcccgcgagctcgcacagcggctgacgacgatcccgggcgtggccgtccgc
gtcgcgcaccgcgacctcggtcatgaatga
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