Microbacterium rhizosphaerae: SM116_10595
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Entry
SM116_10595 CDS
T09585
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg02024
Quorum sensing
mrg03060
Protein export
mrg03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SM116_10595 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SM116_10595 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SM116_10595 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mrg02044
]
SM116_10595 (ffh)
Enzymes [BR:
mrg01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SM116_10595 (ffh)
Secretion system [BR:
mrg02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SM116_10595 (ffh)
Eukaryotic Sec-SRP protein
SM116_10595 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
cobW
nSTAND3
AAA_31
AAA_33
APS_kinase
Zeta_toxin
AAA_16
AAA_30
ArsA_ATPase
AAA_18
AAA
AAA_17
DO-GTPase1
NTPase_1
AAA_24
TsaE
NACHT
MMR_HSR1
ABC_tran
nSTAND_NTPase7
Chlamy_scaf
MobB
KTI12
NPHP3_N
KAP_NTPase
AAA_14
ATP_bind_1
DUF463
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
WPR88232
LinkDB
All DBs
Position
complement(2374001..2375557)
Genome browser
AA seq
518 aa
AA seq
DB search
MATFGTLSDRLTETFRNLRTKGKLTPADVDGTVREIRRALLDADVALPVVKEFTAKVRER
ALGDEVNRALNPAQQVVQIVNEELVAILGGEQRRLQFAKNPPTVIMLAGLQGSGKTTFAG
KLAKQLEKDGHTPLLVAADLQRPNAVNQLQVVAQQAGAAIYAPEPGNGVGDPVKVAKDGV
EQARRALHDIVIIDTAGRLGVDAEMMKQAADIRRAVDPDEVLFVIDAMIGQDAVNTAKAF
QEGVDFTGVVLSKLDGDARGGAALSVASVTGRPIIYASMGEGLDDLEPFYPDRMASRILD
LGDILTLIEQAQAAFDEEEARKVAEKIANDQFTLEDFLDQLQQMKKMGSMKKMLGMLPGM
GQMKQQLDNFDDSEMDRTEAIIRSMTPGERRNPKILNGSRRLRIARGSGMTVTDVNQLVQ
RFDQAAKMMKTVARGGVPNIPGMGPMGKPGASSKRGKTAQKGRSGSRSGNPAKRAAENAG
ITAAPAAPTGSGFGLAGATQGAPTEADMAEIQKLFGNR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggcacgctctccgatcggctcaccgagaccttccgcaaccttcgcacc
aagggcaagctcacgcccgcggacgtggacggcaccgtccgggagatccggcgcgccctg
ctcgacgccgacgtcgcgctgcccgtcgtcaaggagttcaccgcgaaggtgcgcgaacgc
gctctcggcgacgaggtcaatcgggcgctcaatcccgcgcagcaggtcgtgcagatcgtc
aacgaggagctcgtggcgatcctcggcggggagcagcgccggctgcagttcgccaagaac
ccgccgacggtcatcatgctcgcgggcctgcagggctcgggcaagacgaccttcgcgggc
aagctggcgaagcagctcgagaaggacggacacacaccgctcctggtcgccgcggatctg
cagcgaccgaatgccgtcaaccagctgcaggtggtcgcacagcaggcgggcgcagccatc
tatgctcccgagccgggcaacggcgtgggcgacccggtgaaggtcgccaaggacggcgtc
gagcaggcgcgtcgggcgctgcacgacatcgtcatcatcgacaccgccggccgcctcggc
gtggacgccgagatgatgaagcaggcggccgacatccgtcgtgccgtcgacccggacgag
gtgctgttcgtcatcgacgcgatgatcggtcaggatgccgtcaacacggccaaggccttc
caggagggcgtcgacttcaccggcgtggtcctgtccaagctcgacggcgacgcgcgcggc
ggcgctgcgctctcggtcgcctcggtgaccggacgcccgatcatctacgcgtccatgggc
gagggcctcgacgacctcgagccgttctacccggaccgcatggccagccgcatcctggac
ctcggcgacatcctcaccctcatcgaacaggcgcaggccgcgttcgacgaggaggaggcc
cgcaaggtcgcggagaagatcgccaacgatcagttcaccctcgaggacttcctcgaccag
cttcagcagatgaagaagatggggtcgatgaagaagatgctcgggatgctcccgggcatg
ggtcagatgaagcagcagctcgacaacttcgacgacagcgagatggatcgcaccgaggcg
atcatccgctcgatgactccgggcgagcgacgcaacccgaagatcctcaacggctcgcgc
cgactgcgcatcgcacgcggctccgggatgacggtcaccgacgtcaaccagctcgtgcag
cgcttcgaccaggcggcgaagatgatgaagaccgtcgctcgcggcggtgtgccgaacatc
cccggcatgggtccgatgggcaagcccggcgcgtcgagcaagcgcggcaagacggcgcag
aagggccgctccggctcgcgctcgggcaaccccgccaagcgcgcagccgagaacgcgggg
atcaccgcggctcccgctgcaccgaccggttcgggcttcgggctcgcgggagcgacgcag
ggcgcgccgaccgaggccgacatggccgagatccagaagctcttcggcaaccgctga
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