Microbacterium rhizosphaerae: SM116_11645
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Entry
SM116_11645 CDS
T09585
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03420
Nucleotide excision repair
mrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SM116_11645
03430 Mismatch repair
SM116_11645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_11645
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM116_11645
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM116_11645
MMR (mismatch excision repair)
Other MMR factors
SM116_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WPR88428
LinkDB
All DBs
Position
complement(2577978..2579744)
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AA seq
588 aa
AA seq
DB search
MSDGSALEGLDEQQLEAVTTLRGPVCVLAGAGTGKTRVITRRIAHGVDTGAYSPGRVMAV
TFTAKAAGEMRGRLRALGVQGVAARTFHSAALAQLNFFWPSVAGDAAPGIVDNKVRLLAH
AADGLRMDLDRATLRDVAAEIEWRKVTMRSIDQYAQARPGGVGELDGLAVVHLQRAYEAL
KDERRQLDFEDVLLACAGMLEAEPRVAQAVREQYRHFTVDEFQDVSPLQYRLLELWLGDR
RDICVVGDASQTIYSFAGADARYLLEFERRHEGAKVVRLERNHRSDAPVLAVANSLMRGR
PGALNLVSDRPAGDAPTPSVAVFSDDEDEARGVARAIAAQIAAGVDPRAIAVLYRARSQS
PELLRALADEQVATSVLGGTRFFDMPEVRQAVMALRAAAVAPLETTFREAVRDVLRSLGL
TDEPPPAGGAVRDAWEARAAILRLADEAAPGATLRTFADELVARAKAQDEPGMRTVTLAT
LHAAKGLEWDHVHLVGMSEGLLPIAYATTFEQVDEERRLAYVGITRAARTLSLSWSRGRG
RAERQASRFLREIGSGSLRAADARATRAAATRSTATGSARPGAPSRVR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacggcagtgcactcgaggggctcgacgagcagcagctggaggcggtgacgacc
ctccgcggtccggtgtgcgtgctcgccggcgccggcacgggcaagacccgggtgatcacg
cgccggatcgcgcacggtgtcgacaccggggcgtactcgccggggcgagtcatggcggtg
accttcacggccaaggccgcgggcgagatgcgtgggcgcctgcgcgcgctcggcgtgcag
ggcgtcgccgcccgcaccttccactccgcggccctcgcccagctcaacttcttctggcct
tcggtcgccggcgacgcggcgcccggcatcgtggacaacaaggttcgcctcctcgcgcac
gcggcggacggcttgcggatggacctcgaccgcgcgaccctccgcgacgtggcggcggag
atcgaatggcgcaaggtgacgatgcgcagcatcgaccagtacgcgcaggcgcgcccgggc
ggcgtcggcgagctcgacggactggccgtcgtccacctgcagcgcgcgtacgaggcgctc
aaggacgagcgacggcagctcgacttcgaggacgtcctgctcgcgtgcgcggggatgctc
gaggccgagccgcgtgtcgcacaggcggtgcgggagcagtaccggcacttcacggtggat
gagttccaggatgtgtcccccctgcagtaccgccttctcgaactgtggctcggcgaccgc
cgcgacatctgcgtggtgggcgacgcgagtcagaccatctactcgttcgccggcgccgac
gcgcgctacctcctcgagttcgaacgccgtcacgagggcgccaaagtcgtgcggctggag
cgcaaccaccgctccgacgcgcccgtgctggcggtcgccaactcgctcatgcggggccga
cccggcgcgctgaacctcgtctcggatcgaccggcgggcgatgcgcccacgccgtccgtg
gccgtcttctccgacgacgaggacgaggcccgcggggtggcgcgagcgatcgccgcgcag
atcgccgcaggtgtcgacccccgggccatcgccgtcctgtaccgcgcgcgctcccagtcg
ccggagctgctgcgcgcgctcgccgacgagcaggtggcgacgagcgtcctcggcggcacg
cgcttcttcgacatgccggaggtgcgccaggcggtcatggcgctccgcgccgccgccgtc
gcccccctcgagacgaccttccgcgaggcggtgcgggatgtcctgcgttcgctcggactg
accgacgagccgccgcccgcgggcggagccgtgcgggatgcgtgggaggctcgcgcggcg
atcctgcggctggccgacgaagcggctccgggtgccacgctgcgcaccttcgccgatgag
ctcgtggcgagggcgaaggcgcaggacgagccgggcatgcgcacggtcacactcgcgacg
ctgcacgcggccaagggcctcgagtgggaccacgtgcacctcgtcggcatgagcgaaggg
cttctgcccatcgcgtacgcgacgacgttcgagcaggtcgacgaggagcggcgcctggcg
tacgtcgggatcacgcgcgccgcacgaaccctgtccctgtcgtggtcgcggggccggggc
cgagccgagcgacaggcctctcggtttcttcgagagatcggcagcggcagtctgcgtgcg
gccgatgcgcgcgccacacgcgccgcagcgacccggtcgacagcgacagggagtgcgcga
ccgggcgcgccgtccagggttcgctga
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