Microbacterium rhizosphaerae: SM116_11660
Help
Entry
SM116_11660 CDS
T09585
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03420
Nucleotide excision repair
mrg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SM116_11660
03430 Mismatch repair
SM116_11660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_11660
Enzymes [BR:
mrg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SM116_11660
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SM116_11660
MMR (mismatch excision repair)
Other MMR factors
SM116_11660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WPR88431
LinkDB
All DBs
Position
complement(2582045..2585491)
Genome browser
AA seq
1148 aa
AA seq
DB search
MSPAWERPATVSAEGIAAALGLPAPTPEQRAVIEAPPAPALVVAGAGSGKTETMAGRVVW
LIANEHVRRDEVLGLTFTRKAAGELAERIDHRLASIDEYAQRGLVPHIDALAESGELARF
WAGSRDAAPRARRIALSACLDALAARLGAAPPPSLAEDALLRPRVATYNSFADAIVREHG
ARIGRDPDAALMSQSASWLLARRVVIASTDERLAQRGEAFSTVVDAVSALAGDVLDNRAD
LDRIDAFAADWARRVEPFVNPQLQSPGDIEKFHAAMTGLPVLTGLVRDYAQRKTIEETLD
FADQVAGALDIVEQSPAVGEELRGQYRVVLLDEYQDTSVIQTRLLAEIFHDSAVMAVGDP
NQSIYGWRGASADNLSAFAGAFARQTECAHHGLMVSWRNDVDILAAANSLVAGTAHGAVP
VGALQSRPGAGSGRVACRFEATIDDEADAVAQWFADVRAEHAAGQAAAARERAEAGLPAV
EQKAHSGAVLFRAKRHMNTFADALARRGIPHRILGLGGLLSTPEVVDVVAALRVVHDPSQ
GSALIRLLSGPRFAVGVADLGALQELADALSKRDGSLQPLEPRLAARVRGSAGIDEQLSI
IDALEFVRTTREEYRLLGGFTAEGLARLREAGEMFARLRRAAAQPIPDLIRLIEVELRLD
VELAANETRGAARVASAQLRAFLDEVRGFLAGDEQGSVSSLLAWLDHAEETDELVPRTEP
QQPGVVQLLTIHGSKGLEWDAVAVVRLVADELPKAPRTKLGWLGFGTLPYAFRGDRGALP
ALEWDAGAQGTRKELADAITAFKEGNGAHQEQEERRLAYVAVTRARSDLLLTGSTWGGQL
RSRRPSPYLSQMLEALGRDPLPEADPGDNPYLDRGGQVLAWPLDPLGARGPVVRTAAQEV
RAAIAAGDAVPDEELIRLLAERDARTAATRIPAPTRIPASRFKDYVTAFDSTVRAVARPV
PERPYRQTRLGTLFHAWVEQRAERAGVGPSPDDGLWEADIDQPDSEAGAEDAAELARLQA
IFEGSEWGQLAPLEVEAEIDFALDGGAGADHIVVCKLDAVYRRGDRIEIVDWKTGKPPAT
PREREERMLQLALYRVAYHKRHGVPLDQIDVALYYVGDDLVLRDDRIYSESDLAQRWSAA
REARSASA
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccggcgtgggagcgccccgcgaccgtcagcgccgagggcatcgccgccgcgctc
ggactgccggccccgacacccgagcagcgcgccgtgatcgaggcgccgccggctccggcg
ctcgtcgtggcgggcgccgggagcggcaagaccgagacgatggccgggcgcgtggtgtgg
ctcatcgccaacgagcacgtgcggcgcgacgaagtgctgggtctcacgttcacccgcaag
gcggcgggcgagctcgccgagcgcatcgaccatcggctggcgagcatcgacgagtacgcg
cagcggggcctggtcccgcatatcgacgcactcgcggagtccggggagctcgcgcgcttc
tgggcgggatcgagggatgccgccccccgggcccgacggatcgccctgagcgcctgcctc
gatgcgctggcggctcgcctcggcgctgcgccgccgccgtctctcgccgaggacgcgctc
ctgcgcccgcgggtcgcgacctacaactcgttcgcggacgccatcgtgcgcgagcacggc
gcacgcatcggccgcgatcccgacgcagccctcatgagccagtccgcatcgtggctgctc
gcgcggcgcgtcgtgatcgcatcgaccgacgaacggctcgcccagcgcggcgaggcgttc
tcgaccgtcgtcgatgccgtcagcgcgctggccggcgacgtgctcgacaaccgcgcggat
ctcgatcgcatcgacgccttcgccgccgattgggcgcgacgcgtcgagccgttcgtgaat
ccgcagctgcagagccccggcgacatcgagaagttccatgccgcgatgaccggcctgccg
gtgctcaccggcctcgtgcgcgactacgcgcagcgcaagacgatcgaggagacgctcgac
ttcgccgaccaggtcgccggcgccctcgacatcgtggagcagtcgcccgccgtcggcgag
gagctgcgggggcagtatcgcgtcgtgctcctcgacgagtaccaggacacctccgtcatc
cagactcgactcctcgccgagatcttccacgacagcgcggtgatggccgtgggcgacccc
aaccagtcgatctacggctggcgcggcgcatccgccgacaacctctccgccttcgcgggc
gccttcgcccggcagacggagtgcgcgcaccacggactcatggtcagctggcgcaacgac
gtcgacatcctcgccgcggccaacagcctcgtcgccgggacggctcacggcgcggtgccg
gtcggcgcgttgcagtcccggccgggcgcgggcagcggacgggtcgcgtgccgcttcgag
gcgacgatcgacgacgaggcggatgcggtcgcccagtggttcgcggacgtgcgcgcggag
cacgcagccggacaggcggcggcggcgcgcgagcgcgcggaggcgggtctgccggctgtc
gagcagaaggcccactcgggggcggtgctgttccgtgcgaagcggcacatgaacacgttc
gccgatgcgctcgcgcggcgcggcatcccgcaccggatcctcggcctgggcggtctgctg
tcgacgcccgaggtcgtcgacgtcgtcgcggcgctccgcgtcgtgcacgaccccagccag
ggctccgctctcatccgcctgctgtccgggcctcgcttcgccgtgggcgtcgccgacctg
ggggcgctccaagagctggcggacgcgctctccaagcgagacggctcgctgcagccgctc
gaaccgaggctcgccgcccgggtgcgcggctcggcggggatcgacgaacagctctcgatc
atcgacgcgctggagttcgtccgcaccacgcgcgaggaataccgcctcctcggcggcttc
acggcagaggggctcgcgaggctgcgggaagcgggggagatgttcgcgcggctgcgccga
gcggccgcgcagccgatccccgacctcatccggctcatcgaggtggagctgcggctcgac
gtcgagctcgcggccaacgagacgcgcggcgccgcgcgcgtcgcctccgcacagctgcgg
gcgttcctcgacgaggtgcgcggattcctggccggcgatgagcagggctccgtgtcgagc
ctgctcgcatggctcgatcacgccgaggagaccgacgagctcgtgccgcgcaccgagcct
cagcagccgggtgtcgtgcagctgctgacgatccacgggtcgaaagggctcgagtgggat
gccgtggcggtcgtccgtctcgttgccgatgagctgccgaaagccccgcgcacgaagctc
ggctggctcggcttcgggactctcccgtacgccttccgcggcgaccgcggcgccctgccc
gcgctcgagtgggatgccggagcgcagggcacgaggaaggagctcgccgacgcgatcacc
gcgttcaaggaggggaacggcgcccaccaggagcaggaggagcgacggctggcgtacgtc
gcggtgacgcgcgcccgcagcgatctcctgctgaccggatcgacctggggaggacagctg
cggtcgcgtcgcccgagcccgtacctctcgcagatgctcgaggccctgggccgcgatccg
ctgcccgaggcagaccccggcgacaacccgtacctcgaccgaggcgggcaggtcctggcg
tggccgctggatccgctcggcgcgcgcggcccggtcgtgcgaacggcggcgcaggaggtg
cgtgcggcgatcgcggcgggggatgcggtccccgatgaggagctgatccggctgctcgcc
gagcgggatgcccgcacggcggcgacgcgcatccccgcgccgacccgcatcccggcatcg
cggttcaaggactacgtcaccgccttcgactcgacggtgcgcgcggtggcgcggcccgtg
cccgagcgcccttaccggcagacgcggctcggcacgctcttccacgcgtgggtggagcag
cgcgcggagcgcgcgggcgtcggcccctccccggacgacgggctctgggaggccgacatc
gatcagcccgacagtgaggcgggagccgaggacgcggccgagctcgcccggttgcaggcg
atcttcgagggctccgagtggggacagctggccccgctcgaggtcgaagcggagatcgac
ttcgcgctcgacggcggtgccggtgcggaccacatcgtggtgtgcaagctggatgccgtc
taccgacgcggcgaccggatcgagatcgtcgactggaagaccggcaagcctcccgcgacg
ccgcgggagcgcgaggagcggatgctgcagctcgcgctctaccgcgtggcctatcacaag
cggcacggcgtcccgctcgaccagatcgacgtcgcgctgtactacgtcggcgacgacctc
gtcctccgggacgaccggatctactccgagtccgacctcgcccaacggtggagcgccgcg
cgggaggcccgctcggcatccgcctga
DBGET
integrated database retrieval system
