Microbacterium rhizosphaerae: SM116_11760
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Entry
SM116_11760 CDS
T09585
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg00300
Lysine biosynthesis
mrg01100
Metabolic pathways
mrg01120
Microbial metabolism in diverse environments
mrg01230
Biosynthesis of amino acids
Module
mrg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SM116_11760 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mrg01002
]
SM116_11760 (dapE)
Enzymes [BR:
mrg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
SM116_11760 (dapE)
Peptidases and inhibitors [BR:
mrg01002
]
Metallo peptidases
Family M20
SM116_11760 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WPR88451
LinkDB
All DBs
Position
complement(2604917..2605993)
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AA seq
358 aa
AA seq
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MPRLDLSASSVSLTRAICDIPSVSDDETTLADAIFEAVSALPHLEVFRDGDTIVARTDLG
RPQRVAIAGHIDTVPINANVPTRDIEIDGEPYLWGRGTVDMKAGVAVQLKLAAELAEPRV
DLTWMWYDHEEVEADRNGLGRLSRDRPDLFAADFAILGEPSNGQVEGGCNGTMRAVVRTH
GIRAHSARAWVGENAIHRAAPILMRLSEYRPREVTVDGLAYREGLNAVAIRGGIAGNVIP
DLCEIEVNYRFAPSRSAEAAAAHLRDVFAGFEVEITDAAEGARPGLDAPLAQEFLAAVGA
EPRPKYGWTDVARFSSLGVPAVNYGPGDPQLAHHDEERVPLAQIDAVERGLRAWLTAR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctcgacctgtccgcgtccagtgtgtcgctcacccgcgcgatctgcgacatc
cccagcgtctccgacgacgagacgacgctcgccgatgcgatcttcgaggcggtgagcgcg
ctcccgcacctcgaggtgttccgggacggcgacacgatcgtcgcgcgcaccgacctcggc
cgtccgcagcgcgtggcgatcgcgggccacatcgacacggtcccgatcaacgcgaacgtg
ccgacgcgcgacatcgagatcgacggcgagccctacctgtggggccgcggcacggtcgac
atgaaggcgggggtcgccgtgcagctgaagctcgccgccgagctcgccgagccccgcgtc
gacctcacctggatgtggtacgaccacgaagaggtcgaggccgaccgcaacggcctcggg
cgcctctcgcgagaccgcccggatctgttcgccgccgacttcgcgatcctcggcgaaccg
tccaacggtcaggtggaaggcggatgcaacggcacgatgcgcgccgtcgtccgcacgcac
ggcatccgtgcgcacagcgcccgtgcgtgggtgggcgagaacgccatccaccgcgccgcg
cccatcctcatgcggctgtccgagtaccgcccgcgggaggtgaccgtcgacgggctcgcc
taccgcgagggcctcaatgccgtcgccatccgcggcggcatcgccggcaacgtgatcccc
gacctctgcgagatcgaggtgaactaccgcttcgcacccagccggtcggccgaggccgcc
gccgcgcatctgcgcgatgtgttcgccggcttcgaggtcgagatcacggatgcggccgag
ggggcgcgaccgggtctggatgcgccgctcgcacaggagttcctcgccgccgtgggcgca
gagccccgaccgaagtacgggtggaccgatgtcgcccggttctcgtccctcggcgtacct
gcggtcaactacggtccgggtgacccgcagctggcccaccacgacgaggagcgggtgccg
ctcgcccagatcgacgccgtcgagcgtggactgcgggcatggctgacggcacgctga
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