Microbacterium rhizosphaerae: SM116_12130
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Entry
SM116_12130 CDS
T09585
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg03030
DNA replication
mrg03430
Mismatch repair
mrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SM116_12130
03430 Mismatch repair
SM116_12130
03440 Homologous recombination
SM116_12130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrg03032
]
SM116_12130
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_12130
Enzymes [BR:
mrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SM116_12130
DNA replication proteins [BR:
mrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SM116_12130
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SM116_12130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WPR88522
UniProt:
A0ABZ0SMM1
LinkDB
All DBs
Position
2678941..2679528
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AA seq
195 aa
AA seq
DB search
MGLDFTAIDFETANSSNASACAVGLARVRDGRIVAQAGWLIQPPAGHDAFFEINVGIHGI
RPEDVRDAPTWTAQLDDLAAFAGADVLVAHNAGFDMAVLRAACDVTGDLCPPYRYACSLQ
IARRLYDLESYRLPSVAAAAGFTGFAHHDAAADALACAHIMIDAARRTGADDIAHLADAA
GVEMRRIPAPALFAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtgggattggatttcaccgcgatcgacttcgagacggcgaattccagcaatgcgtcggcg
tgcgcggtgggcctcgcccgcgtacgcgacggccgcatcgtcgcccaggcggggtggctc
atccagccgcccgcgggacacgatgccttcttcgagatcaacgtggggatccacggcatc
cgccccgaggacgtccgggacgcacccacctggacggcgcagctcgacgacctcgccgcg
ttcgcgggcgcggacgtgctcgtcgcgcacaacgcgggattcgacatggccgtactgcgc
gccgcgtgcgacgtgaccggggacctctgtccgccctaccgctacgcgtgcagcctgcag
atcgcgcggcggctgtacgacctcgagtcctatcgcctcccgtcggtcgcggcggccgcg
ggcttcaccggcttcgcgcaccacgacgcggccgcagacgcactcgcctgtgcgcacatc
atgatcgatgcggcgaggcgcaccggagcggacgacatcgcccacctggccgatgcggcc
ggcgtggagatgcggcgcatccccgcgccggcgttgttcgcggcctga
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