Microbacterium rhizosphaerae: SM116_15940
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Entry
SM116_15940 CDS
T09585
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mrg
Microbacterium rhizosphaerae
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrg03400
]
SM116_15940
DNA repair and recombination proteins [BR:
mrg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SM116_15940
Archaeal homologous recombinant proteins
SM116_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_27
AAA_29
AAA_21
AAA_15
THDPS_N_2
Motif
Other DBs
NCBI-ProteinID:
WPR89232
LinkDB
All DBs
Position
complement(3516221..3519274)
Genome browser
AA seq
1017 aa
AA seq
DB search
MKLHRVELEGFGPFRERQTVDFDAFADDGLFLLTGRTGAGKSSVLDGVCFALYGSVPRYA
DGDKRLRSDHCDPDDPSEVVLDFEVASGRWRVSRSPEYQRPKRRGEGVTTEGQRARLDEW
GGGEWMTRASGPRDVGLALDEILGLTRDQFLQVILLAQGRFQQFLLAKNDERQTLLRTLF
GTRRYEQYQQALEDRRRAAERALGEGGALVGMLLDQVEGLVADRGLGDPPSDGDESTPAD
PAERLDLVLRAVARGAYRAETAAHARDAAGAAFERASAAHAALQLRLQSRAARDRSRTAL
ASIEEQGPAIAADRSVLERADRAEELRDVLAAVGRADRAHGAAEAALAEASRVWEAAAGV
EADGLNTADTDGLRTHADLLTGRIALWDAALGVERELDDIRADARAAAEAVAAGETLIAA
IDERRAAVPARLAELDAGIARLAETAAGVAPTEAALAELEARLTAAREAESLATALLAAE
RSYTTRIEATQSAAAALAALLRRRLAGHAAELAGALVAGEPCAVCGSPEHPQPAVPVAGA
EPVTDAEIAGAEEARDAAARAEGVAATAAREARAAHAEASARAGGEPIAALELRRADRIQ
ALQAAVAARELRDRLVLERADLVTRDAAAEAERAEAARLMTEATAQAATARSRAQHAEQT
VQDARGDAPSVSERIAAATAERDAARALIAALDARALATAELAAASRERDGRIDASVFGG
SGADAQERAAAVRAALLDEAVRAALAARIRAHEIALASEKERLLQLELDLAADDGSELDE
PASAQAVADAREAWNLAVAAAAEAKQTAAALTDLVQRADAAHAATADLAERHTVVQRLAH
TVAGRPPNTHLMTLETFVLAAELEEIVERANLRLAEMSAGRYRLQHTDALARRRTASGLG
LEVMDSFTGHARSPQSLSGGETFLASLALALGLAEAVTANAGGIRLDTLFIDEGFGSLDT
ETLDLAMRTLDELRQGGRTVGIISHVETMKEQIPAQLQVEATPQGPSRILQGVAIPG
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgcatcgcgtcgaactcgagggcttcgggcctttccgcgagcgtcagaccgtc
gacttcgacgcgttcgcggacgacggcctgttcctgctgaccggccgcaccggcgccggg
aagtcgagcgtcctcgacggcgtgtgcttcgcgctctacgggtcggtgccgcggtacgcc
gacggcgacaagcgcctgcgcagcgaccactgcgaccccgacgaccccagcgaggtcgtg
ctcgacttcgaggtcgcgagcggtcggtggcgcgtgtcccgctcgccggagtaccagagg
ccgaagcgccgcggcgaaggcgtcacgaccgagggacagcgcgcccgactcgacgagtgg
ggcggcggggagtggatgacgcgggcctccggtccgcgcgacgtgggcctcgcgctggac
gagatcctcggcctcacccgtgaccagttcctgcaggtcatcctcctggcgcaggggcgg
ttccagcagttcctcctggccaagaacgacgagcggcagactctgctgcgcaccctcttc
ggcacgcgccgctacgagcagtaccagcaggcgctggaggaccgtcgccgcgccgcggag
cgcgcgctcggcgagggcggcgctctcgtgggcatgctcctggatcaggtggaggggctc
gtcgcggatcggggcctcggcgatccgccttcggacggcgacgagtcgacgcccgccgat
ccggccgagcgcctggacctcgtgctgcgggcggtggctcgcggggcgtaccgcgccgag
acggccgcacacgcgcgggatgccgccggcgcggcgttcgaacgggcctcggctgcgcac
gccgccctgcaactgcggctgcagtcgcgcgccgctcgcgatcggtcgcgcaccgcgctc
gcgtcgatcgaggagcaggggcccgcgatcgcagctgaccggtccgtgctcgaacgggcc
gaccgcgccgaggagctgcgcgatgtgctcgccgccgtcgggcgggcagatcgcgcccac
ggcgccgccgaggcggcgctggccgaggcatcccgcgtctgggaagccgctgcgggagtc
gaggcggatgggctgaataccgccgacaccgacgggctccgtacgcacgccgatctgctg
acgggtcggatcgccctgtgggacgccgcgctcggagtggagcgcgagctcgacgacatc
cgggcggacgcacgagcggcagccgaggcggtcgcggcaggcgagacgctcatcgcggcg
atcgacgagcggcgtgccgccgtaccggctcgccttgccgagctcgacgccggcatcgcc
cggctcgccgagacggccgcgggagtggctccgaccgaggccgccctcgccgagctcgag
gcgcggctgacggctgcgcgggaggccgagtcgctcgcgaccgcactgctcgcggccgag
cggtcgtacacgacccgcatcgaggcgacccagagcgccgccgcggcgctcgccgccctc
ctgcgccgcaggctcgccgggcacgcggccgagctcgccggcgccctcgtcgccggcgag
ccgtgcgcggtgtgcggatcgcccgagcatccgcagcctgccgtgccggtggccggcgcc
gagcccgtcaccgacgccgagatcgccggcgccgaggaggcgagggatgccgcggcccgc
gccgagggcgtcgccgcgacggcggcgcgcgaggctcgtgcggctcatgccgaggcctcg
gcgcgagcgggcggcgagccgatcgccgcgctcgagctgcgtcgggccgaccggatccag
gcgctccaggccgccgttgcggcacgagaactgcgggatcgcctcgtcctcgagcgcgcc
gacctggtcacgcgcgacgccgcggcggaggcggagcgggcggaggccgcacggctgatg
accgaggcgacggcgcaggcggcgactgcgcggtcgcgggcgcagcacgccgagcagacg
gtgcaggacgcgcgcggcgacgccccgagcgtctccgagcggatcgcggccgcgacggcg
gagcgggatgcggctcgcgccctcatcgccgcgctcgatgcgcgggcgctcgcgaccgcc
gagctcgccgccgcatcgcgtgagcgcgacgggcggatcgacgcatccgtcttcggcggc
tccggtgccgacgcgcaggagcgggccgccgccgtgcgggccgcgctgctcgacgaggcc
gtgcgagcggccctggccgcccgcatccgcgcccacgagatcgccctcgcgtccgagaag
gagcggctgctgcagctcgagctcgatctcgccgccgacgacggctccgagctcgacgag
ccggcgtccgcgcaggccgtggcggatgcgcgcgaggcgtggaatctcgccgtcgcggcg
gccgccgaggcgaagcagacggcggcagcgctcaccgatctcgtgcagcgggcggacgcc
gcgcacgcggccaccgccgacctcgccgagcggcacaccgtggtgcagcggctggcgcac
acggtcgccggtcgtccgccgaacacgcacctcatgacgctcgagacgttcgtgctcgcc
gccgagctcgaggagatcgtcgagcgcgccaacctgcggctcgcggagatgtcggcggga
cggtaccggctgcagcacaccgacgcgctcgcccgccggcgcacggcgtccggcctcggg
ctcgaggtcatggactcgttcacggggcacgcgcggtcgccgcagtcgctgtcgggaggc
gagacgttcctcgcctcgctcgccctcgccctggggctcgcggaggcggtcaccgcgaat
gccggcggcatccgtctcgacacgctcttcatcgacgagggcttcggctccctcgacacc
gagaccctcgacctcgcgatgcgcaccctcgacgagctgcgccagggcggccggacggtc
ggcatcatcagccacgtcgagacgatgaaggagcagatcccggcgcagctgcaggtcgag
gccacgccccaggggccgagccgcatcctgcaaggcgtcgccatccccggctga
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