Microbacterium rhizosphaerae: SM116_18220
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Entry
SM116_18220 CDS
T09585
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mrg
Microbacterium rhizosphaerae
Pathway
mrg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mrg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
SM116_18220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrg03019
]
SM116_18220
03009 Ribosome biogenesis [BR:
mrg03009
]
SM116_18220
04131 Membrane trafficking [BR:
mrg04131
]
SM116_18220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrg04147
]
SM116_18220
Messenger RNA biogenesis [BR:
mrg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
SM116_18220
Ribosome biogenesis [BR:
mrg03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
SM116_18220
Membrane trafficking [BR:
mrg04131
]
SNARE
SNARE associated proteins
Others
SM116_18220
Autophagy
Aggrephagy
Other aggrephagy associated proteins
SM116_18220
Exosome [BR:
mrg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SM116_18220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_5
AAA_2
AAA_lid_3
RuvB_N
AAA_28
AAA_22
AAA_16
AAA_33
AAA_17
TsaE
AAA_14
TIP49
AAA_18
AAA_24
AAA_25
bpMoxR
AAA_11
AAA_19
Acetyltransf_1
NACHT
SKI
RNA_helicase
Mg_chelatase
nSTAND3
IPT
Cytidylate_kin
Vps4_C
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WPR89668
LinkDB
All DBs
Position
complement(4016262..4017536)
Genome browser
AA seq
424 aa
AA seq
DB search
MARTYIRDFHGDDLDQIVRLWGQVTGENEWPIYSLAEVIASCQQDYAVVAMQGDDLVGAV
VGRAAHAQGWIVFFGVADAVTPAEVSTALLDALERRMAPLGLAKLSVLIPEADGLDAFTA
NAFEVHHSVRYVERDMPVQRREIEALKDVGGRILPRHLWERVAGMAHEKQLLEERLVTPL
SRPELAARFGVVPPRAVMLFGPPGTGKTTFARGVASRLGWPFVELFPSRLADSAGGLAGA
LRSAFEKIDELEHAVVFIDEVEEIASRRGGIPPSPTQGVTNELLKLVADFRDREGRLLIC
ATNFIRALDAAFLRHGRFDYVIPIGLPDADARRAIWGRYIPPESAQGIDLDRLVSDSEGL
TPADIEYAARRASQEALARALSDEDADSLLTTHDYERALGNTRATVSPEAIDEFHADIET
IARL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggacgtacatccgcgacttccacggcgacgatctcgaccagatcgtgcggctg
tggggccaggtcaccggcgagaacgagtggccgatctactcgctcgccgaggtgatcgcc
tcctgccagcaggactacgccgtcgtcgcgatgcagggcgacgacctcgtcggagccgtg
gtgggacgcgccgcccacgctcagggctggatcgtgttcttcggtgtcgcggatgccgtc
acgcccgccgaggtgagcacggcacttctcgacgcgctcgagcgccggatggcgccgctc
ggcctcgcgaagctctcggtgctgatccccgaggcggacgggctcgacgcgttcaccgcg
aacgccttcgaggtgcaccactccgtccgctacgtggagcgcgacatgcccgtgcagcgc
cgcgagatcgaggcgctgaaggacgtcggcggtcgcatccttccccgccatctgtgggag
cgcgtcgccggcatggcgcacgagaagcagctgctcgaggagcgcctggtcacaccgctc
tcgcggcccgagctcgccgcgcggttcggcgtcgtcccgccgcgggcggtcatgctcttc
ggtccgcccggcaccgggaagacgacgttcgcgcggggcgtcgcatcccgcctcggctgg
ccgttcgtcgagctcttcccctcccgcctcgccgactctgccggaggattggcgggggcg
ctccgctcggccttcgagaagatcgacgagctcgagcacgccgtggtgttcatcgacgag
gtcgaggagatcgcatcgcgccgcggcggcatcccgccgtcgccgacgcagggtgtcacg
aacgagctgctgaagctcgtcgccgacttccgcgatcgcgaggggcggctgctcatctgc
gccacgaacttcatcagggcgctagatgccgcctttctccgccacggacgcttcgactac
gtgatcccgatcgggctccccgatgccgacgcccgccgcgccatctggggacgctacatc
ccgcccgagtcggcgcaagggatcgacctcgaccggctcgtgtccgacagtgaggggctg
acgccggccgacatcgagtacgcggcgcggcgcgcatcgcaggaggcgctcgctcgcgcg
ctgagcgatgaggatgccgattccctgctgacgacccacgactacgagcgcgcgctcggc
aacacgcgcgccaccgtgtcgccggaggcgatcgacgagttccacgccgacatcgagacg
atcgcccgcctctga
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