Mycolicibacterium rhodesiae: MycrhN_0804
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Entry
MycrhN_0804 CDS
T01685
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MycrhN_0804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_0804
Enzymes [BR:
mrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MycrhN_0804
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MycrhN_0804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
UvrD-helicase
RecD_N
AAA_16
SH3_13
PhoH
nSTAND3
AAA_28
NTPase_1
Mg_chelatase
DUF3322
AAA_5
Herpes_Helicase
TraI_hel_assoc_N
SRP54
NACHT
TrwB_AAD_bind
T2SSE
AAA_29
ATPase
MukB
CbiA
DO-GTPase1
AAA_24
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AEV71435
UniProt:
G8RQM9
LinkDB
All DBs
Position
825112..826797
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AA seq
561 aa
AA seq
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MSLEAFEELFEPADTHVARRLTAIANEPDESVALAIAVAVRALRGGSVCVDLRSIADQLE
MPDLPWPSPDDWLNAVRASPLATDKPVLRLYSDSTADLLYLDRYWLEEQQVCDDVLTLLS
STLPGAVPGLERLFPEGWEEQRAAAEIALTQSLTVLTGGPGTGKTTTVARLLALLAEQAS
LSGKPPLRIALAAPTGKAAARLLEAVQLEIDKLDAVDRDRLPELKASTLHRLLRTRPDNS
SRFRHHRENRLPHDVIVVDETSMVSLTLMARLLEALRPDSRLLLVGDPDQLASVEAGAVL
ADMVDGLGERSDVRIAALTTSHRFGKSIGALASAIRVGDADEVVSLLRAGGEHIEWLETD
EPAEHLRKVLLPHALRLREAAILGDVTAALSTLDEHRLLCAHRRGPYGVRFWNHHVERWL
ADATGEPLWTQWYAGRPVLVTANDYGLGLYNGDTGVTVVRGDGLRAVVAAGSEPIEFATG
RLPDVDTMHAMTIHKSQGSQADEVTVLLPPEDSRLLTRELFYTAVTRAKERIRVIGTEPS
VRAAVQRRAVRASGLAQRLRA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctcgaggcgttcgaggagctcttcgagccggccgacacccacgtcgcgcgacgg
ctcacggcgatcgccaacgagcccgacgaatcggtcgcgttggccatcgccgtcgcggtg
cgggcgctgcgcggcgggtccgtgtgcgtggatctgcggtcgatcgccgaccaactcgag
atgcccgacctgccctggccgtcgccggacgactggctgaacgcggtgcgggcgagcccc
ctcgccaccgacaagccggtgctgcgactctactcggattccaccgccgacctgctctac
ctggaccggtactggctggaagaacagcaggtgtgcgacgacgtgctgacgctgttgtcg
tcgaccctgcccggcgcggtgcccggtctcgagcggctcttccccgaaggctgggaggaa
cagcgcgcggcggcggaaatcgctctcacacagtcgcttacggtgctgaccggcgggccg
ggcacaggtaagaccacgacggtcgcgcggctgctggcgctgctggccgagcaggcgtcg
ctgtctggcaagccgccgctgcgcatcgcgctcgcggcgccgaccggtaaggcggccgcg
cggctactcgaagcggtgcagctggagatcgacaagctcgacgccgtcgatcgcgaccgg
ctgccggaattgaaggcctcgacgctgcatcggctgctgcggacacggccggacaactcg
tcgcggttccggcatcaccgcgagaaccggctgccgcacgacgtgatcgtcgtcgacgag
acgtcgatggtgtcgctgacactgatggcgcgactgctcgaagcgttgcgccccgacagc
cggctgctactggtcggcgaccccgaccagctggcctcggtcgaggcgggtgcggtgctc
gcggacatggtcgacggcctcggcgagcggtctgacgtgcgcatcgcggcgttgacgacg
tcgcaccggttcggcaagtcgatcggcgcgctggcctcggccatccgggttggtgacgcc
gatgaggtcgtctccctgctgcgggccggcggcgagcacatcgaatggctcgagaccgac
gagcccgccgagcatctgcgcaaagtgcttctcccccatgccttgcggctgcgggaagcg
gcgatcctcggcgatgtgacggccgcgctgtcgacgctggacgagcaccgactgttgtgc
gcgcaccggcgcgggccgtacggggtgcggttctggaatcaccacgtcgagcgatggctg
gccgatgcgaccggtgagccgctgtggacgcagtggtacgccggtcggcccgtgctggtg
accgccaacgactacgggttgggtctgtacaacggagacaccggcgtgacggtcgtgcgc
ggcgacgggctgcgcgccgtcgtggccgccgggtccgaaccgatcgagttcgcgaccggg
cggctccccgacgtcgacacgatgcacgccatgacgatccacaagtcgcagggcagtcag
gccgacgaggtgaccgtgttgctgccgcccgaggattcgcgcctgctgacccgcgagctg
ttctataccgcggtgacgcgcgccaaggagaggatccgcgtcatcgggaccgaaccgtcg
gtacgcgcggcggtgcagcggcgagcggtccgagcgtccgggctggcgcagcgcctgcgg
gcctag
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