Mycolicibacterium rhodesiae: MycrhN_0901
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Entry
MycrhN_0901 CDS
T01685
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03420
Nucleotide excision repair
mrh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MycrhN_0901
03430 Mismatch repair
MycrhN_0901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_0901
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MycrhN_0901
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MycrhN_0901
MMR (mismatch excision repair)
Other MMR factors
MycrhN_0901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
FdsD
Motif
Other DBs
NCBI-ProteinID:
AEV71531
UniProt:
G8RRU0
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All DBs
Position
934722..937493
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AA seq
923 aa
AA seq
DB search
MTSYTPSQQEAIGCLDETLQIIACAGSGKTQVISQRIANILGEPGVEPRNIIAFTFTEKA
AAELKDRVLRLVEEQHGEVVGMAEMYIGTMHGYCLDLLQRLVPDTFKFSVLTEITARLLV
DRNSKKSGLTTCPTSSAKTPTLRRFIHSRLYLQIASILREDIVDEDLVDQRVWECLDSYL
RLLVEKAEFDFTEMINLAVSFLEADPDEDEDARTIHDHVQNDIKYVVVDEYQDVNALQER
LVVGLVKYGANLCVVGDDDQTIYQWRGSQVANIISFTERHEGVRQVTLAENFRSSKGIVE
LGRSVAERISPSDRLAKTMASAQTQPWDRGDILALTFDDENAEASWICDRIGDVRGVPFS
DAPGSVARGLSWSDFAVLFRSVAKDAGPLVEELQRRGIPYIVKGLNRLFDSPEIIAVVGL
FRFMTREINADTLSQLWVDADLVPDVQLWPGAVAILEEGRNFDRGDRWGVYNIQRVYLDF
LAALELREESVPGLPGRGELVFYQLGKFSQVISDFEQIYFNSAPAQKYESFVAWLTHQAP
DYYAESDADVGYASPDAVTLSTVHQAKGMQWPAVFVPCLRRNRFPSKRQGGLSVFHVIPE
NAVTDADRYRGTVEDETRLFYVAITRAQKYLWLSYSPGPNQLYKNRSEFFDHCTGQTWVS
TRPSTKPLPNRIEQQPRHDVPEVTFSFSELKYLFECPYSFKLRFLYGFNPPLHEALGYGK
GLHDALSEVHKKAVAGEILDESVAQDLVDRHLFTPFAYPELRETLHRSAVAAIKRYFATH
GDDIPRTVHSEKQIQVHVAPGITVDGRIDLIRRLDTDELSIVDFKSTDRAQPEEVTRDQL
HVYAVGYEELTGENADLIEVLNLDEAGKSTREEVESGLLTDVRERIREAGGSLRDNQLNR
LASWCMQCERCDLAGICRDRANV
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctacacgccgtctcagcaagaagccatcggatgcctagatgagactctgcag
atcattgcttgcgcgggatccggtaagacacaagtcatttcgcagcgcatcgcaaacatc
ctcggcgaacccggggtcgagccacggaacatcatcgcatttacctttactgagaaggcc
gctgcggagctaaaggaccgagtgcttcgcctcgtagaggaacagcacggtgaagttgtg
gggatggccgagatgtacatcggcaccatgcacggttactgcctagacctcctgcaacgt
ctcgttccagacactttcaagttctccgtgcttacggagataaccgcgcggttgctcgtt
gaccgcaacagcaagaagtcgggccttacgacctgcccgacgtcttccgcgaagacacct
acactgcgacgcttcatccactctcggctgtaccttcagatcgccagcatcttgcgcgaa
gacatcgtcgacgaagacctcgtcgaccagcgtgtttgggagtgtctggactcgtacctc
cgccttctcgtcgagaaggcggagttcgacttcaccgaaatgatcaaccttgccgtgtca
tttctcgaagcggatcctgacgaggacgaggacgcccgcactattcacgatcatgtccag
aacgacatcaagtacgttgtcgtcgacgagtaccaggatgtgaacgcgctccaggagcgc
ctagtcgtcggcctcgttaagtacggcgccaacctctgcgtcgtcggtgacgatgatcaa
accatataccaatggcgcggcagccaggtcgccaacatcatcagcttcacggaacgccat
gaaggagttcgacaagtcactcttgccgagaactttcgctcaagcaagggcatcgtcgaa
ttgggacggtctgttgctgaacggatttcgccctccgaccggttagcgaaaaccatggcg
tcggcccaaactcagccgtgggatcgtggcgacatacttgctctgacgttcgacgacgag
aacgccgaagcatcctggatatgcgaccgcatcggagacgtgcgcggtgtgcccttttcc
gatgctccaggtagcgtcgcccgaggattgtcgtggtccgatttcgcagttctcttccgt
tcagtcgcgaaggacgccggaccgctagtggaggaactccagcgtcgaggtatcccatac
atagttaaagggctcaacaggctcttcgacagtcccgaaataatcgcggtcgttggtctg
ttccgattcatgacacgtgagatcaacgccgataccttgagccagctttgggtcgatgcc
gatcttgtaccagacgtgcagctctggcccggtgccgtagcgatcctcgaagagggtcga
aacttcgaccgcggcgatagatggggtgtctacaacatccaacgtgtctatctcgatttt
cttgcagccttagaactccgtgaagagtcggtgcctgggctaccgggccgcggcgaactt
gtgttttaccaactcggaaagttcagccaggtcatctccgacttcgagcagatctacttc
aactccgcacccgcccagaagtacgaatccttcgtagcgtggctcacccaccaagcgccc
gactactacgcagagtctgacgccgacgttgggtacgcttccccagatgccgtcacctta
tccacagtgcatcaggccaagggcatgcaatggccagcagttttcgtcccgtgtctgcgt
cggaatcgctttccgtcgaagcgccagggcgggctgagtgtctttcatgtcatccccgag
aacgcggtcacagatgctgaccgttaccgcggcacggtggaggatgaaacccgcctcttc
tacgtagcaatcactcgtgcccaaaagtacctctggctgagctactccccaggccctaat
caactgtataagaaccgatctgagttcttcgaccactgcaccggccagacttgggtgtcc
acgcgaccgagcacgaaaccactgccgaacaggatcgagcagcaaccgagacacgatgtt
ccagaagttaccttctcgttctcggagctgaagtacctcttcgagtgcccttactccttc
aaactccgtttcttgtacggatttaaccctcccctgcacgaggcgcttggatacggcaaa
gggttacatgatgcgttgtcggaagtgcataagaaggctgttgcaggcgagatcctcgat
gaatccgttgcccaggatttggttgatcgtcatctgttcacgcccttcgcctatcccgag
cttcgcgagactctccatcgatcagcggtcgccgccatcaagcggtacttcgcaacacac
ggcgacgacatcccgcgaactgtgcattcggaaaagcaaattcaggtacatgtagcgccg
ggcatcaccgtcgacggacgaattgacctcatccggagactcgacaccgacgaactctcg
atcgtcgatttcaagtccaccgaccgcgctcaacctgaagaagtcactcgggatcagttg
cacgtgtatgcagtcgggtacgaagagctaactggcgagaatgccgatttgattgaggta
cttaacctcgacgaagccgggaagagcacacgcgaggaagtcgagagtggcctgcttacc
gacgttcgtgagcgcatccgtgaagctgggggatcgctgcgagataaccaattaaaccga
ctcgcttcgtggtgcatgcaatgcgagcgatgtgacctcgccgggatttgccgtgatcgc
gcgaacgtgtga
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