Mycolicibacterium rhodesiae: MycrhN_2162
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Entry
MycrhN_2162 CDS
T01685
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mrh
Mycolicibacterium rhodesiae
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrh03032
]
MycrhN_2162
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_2162
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MycrhN_2162
DNA replication proteins [BR:
mrh03032
]
Prokaryotic type
DNA Topoisomerases
MycrhN_2162
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MycrhN_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Rep_1B
Motif
Other DBs
NCBI-ProteinID:
AEV72757
UniProt:
G8RRX4
LinkDB
All DBs
Position
2186981..2189758
Genome browser
AA seq
925 aa
AA seq
DB search
MADGNVRRLVIVESPTKARKIAGYLGSNYIVESSRGHIRDLPRNAADVPAKFKSEPWARL
GVNVEDDFEPLYIISPEKKSTVAELKDLLKSVDELYLATDGDREGEAIAWHLLETLKPRI
PVKRMVFHEITEPAIRAAADDPRDLDNDLVDAQETRRILDRLYGYEVSPVLWKKVAPKLS
AGRVQSVATRIIVSRERERMAFRSAGYWDVTAELDASVSNAQASPPTFTAKLNSVDGRRV
ATGRDFDSLGGLKKPDEVLVLDQSAAGALAAGLRGAQLEVSSVEQKPYTRRPYAPFMTST
LQQEAGRKLRFSSERTMSIAQRLYENGYITYMRTDSTTLSESAINAARTQATQLYGQEYV
HPSPRQYTRKVKNAQEAHEAIRPAGDVFQTPGQLHAQLDTDEFRLYELIWQRTVASQMAD
ARGTTLSLRISGSSSDGQQVVFSASGRTITFAGFLKAYVESIDEQAGGEADDAESRLPNL
EQGQRVDAKELTADGHTTSPPARYTEASLIKALEDLGIGRPSTYSSIIKTIQDRGYVHKK
GSALVPSWVAFAVTGLLEQHFSRLVDYGFTAAMEDELDEIASGNERRTNWLHNFYFGGDH
GVEDSIARSGGLKKLVGVNLEGIDAREVNSIKLFDDDQGRAINVRVGRNGPYLERMVPDP
DNSGELKPQRANLNDELTPDELTLELAEKLFSTPQEGRSLGVDPATGHEIVAKDGRYGPY
VTEVLPTPDEPDDDAGSTAKKGKKPTGPKPRTGSLLRTMDLETVTLDDALRLLSLPRVVG
VDPTTNEEITAQNGRYGPYLKRGTDSRSLATEEQMFDITLDEALKIYSEPKRRGGQRAAA
PPLRELGNDPATDKPMVIKDGRFGPYVTDGETNASLRKGDDVMSLTDGRAAELLADRRAR
GPVKKKSTKKAAKKKAPAKKAAKKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacggcaacgtgcggcggctcgtcatagtcgagtcgcctaccaaggcgcgcaaa
atcgccggttaccttggctccaattacatcgtggagtcctcgcgtggccatatccgcgac
ctgccgcgtaacgccgccgacgtgcccgcgaagttcaagtcggagccgtgggcgcgactc
ggcgtcaacgtcgaggacgacttcgagccgctctacatcatcagcccggagaagaagagc
accgtcgcagagctgaaggacctgctcaagagcgtcgacgagctctatctggccacggac
ggtgaccgtgagggcgaggccatcgcgtggcatctgctggagactctcaagccccgcatc
ccggtgaagcggatggtcttccacgagatcaccgaaccggccatccgggccgccgccgac
gatccgcgggatctggacaacgatctggtcgatgcgcaggagacccggcgcatcctggac
cggctgtatggctacgaggtcagcccggtgttgtggaagaaggtggcgccgaagctgtcc
gccggccgggtgcagtccgtcgcaacccgtatcatcgtctcgcgcgagcgggagcggatg
gcgttccgcagcgcgggctattgggacgtgaccgccgaactcgacgccagtgtgtccaac
gcccaggcctcgccgcccacgttcacggccaagctgaactcggtcgacggtcggcgggtg
gccaccggtcgcgacttcgactcgctgggtggtctcaagaagcctgacgaggtgctcgta
ctcgaccagtccgccgccggtgcgctcgccgccgggctgcgcggcgcgcagctcgaggtg
tcgtccgtcgagcagaagccttacacgcgtaggccttacgcaccgttcatgacgtcgacg
ctgcagcaggaggcgggccggaagctgcggttctcctcagagcgcacgatgagcatcgcg
cagcggctctacgagaacggctacatcacttacatgcgtaccgactcgacgaccctgtcg
gagtcggcgatcaacgcggcgcgcacgcaggccacccagctttacggtcaggagtacgtg
catccgtcgccgcggcagtacacccgcaaggtcaagaacgcccaggaagcgcacgaggcc
atccggccggccggagacgtgttccagaccccggggcagctgcacgctcagttggacacc
gacgagttccgcctgtatgagctgatctggcagcgcacggtcgcgtcgcagatggccgac
gcacgcggcaccacactgtcgctgcggatctcaggttcttcgagtgacggtcagcaggtc
gtgttcagcgccagcggccgcaccatcaccttcgccggattcctgaaggcctatgtcgag
agcatcgacgagcaggccggtggcgaggccgacgacgccgagagccggctgccgaatctc
gagcaaggccagcgggtcgacgcaaaggagctcaccgccgatggccacacgacgtcgccg
cccgcgcgctacaccgaagcctcactgatcaaggcgctcgaagatctcggcatcggacga
ccgtcgacgtactcgtcgatcatcaagacgatccaggaccgcggctacgtccacaagaag
ggcagcgcgctggtgccgtcgtgggtggcgttcgccgtcaccggtctgctcgaacagcac
ttctcgcgcctggtggactacgggttcaccgccgcgatggaggacgagctcgacgagatc
gcctcgggtaacgagcgacgcaccaactggctgcacaacttctacttcggcggcgaccac
ggggtcgaggactcgatcgcccgctctggtggcctgaagaagctggtcggagtgaacctc
gagggcatcgacgcccgagaagtcaactccatcaagctgttcgacgacgatcagggtcgt
gcgatcaatgtccgggtcggccgcaacgggccctatctcgaacgcatggttcccgatccg
gacaattccggggaactcaagccgcagcgcgccaacctcaacgacgagctgaccccggac
gagttgaccctcgaactggccgaaaagcttttcagcacaccgcaagagggccgatcactc
ggtgtcgacccggccaccgggcacgagatcgtcgccaaggacgggcggtacggaccgtac
gtcaccgaggtgctgcccaccccggacgagcccgacgacgatgcgggctcgacagcgaag
aagggcaagaagccgacgggacccaagccgcgcaccggttcgctgctgcggacgatggat
ctggaaacggtgacgctggacgatgcgctgcggctgctctctcttccgcgcgtggtcggg
gtcgacccgaccaccaacgaggagatcaccgcgcagaacggccgctacggcccatacctc
aagcgcggcacggactctcgatcgttggccaccgaggagcagatgttcgacatcaccctc
gacgaggcgctgaagatctactcggagccgaaacgccgtggcggacaacgggctgccgca
ccgccgctgcgcgaattgggcaatgaccccgcgaccgacaagccgatggtgatcaaggac
ggccgcttcggcccgtacgtcaccgacggtgagaccaacgcgagcctgcgcaagggtgac
gacgtgatgtcgctgaccgacgggcgcgctgcagaactgctcgccgaccgccgcgcgcgt
ggcccggtcaagaagaaatcgaccaagaaggccgcgaagaagaaggctcccgccaagaaa
gcagccaagaaggcctaa
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