Mycolicibacterium rhodesiae: MycrhN_2297
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Entry
MycrhN_2297 CDS
T01685
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MycrhN_2297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_2297
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_2297
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MycrhN_2297
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MycrhN_2297
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MycrhN_2297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
RecQ_Zn_bind
DacZ_P
HEM4
SWI2_SNF2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEV72887
UniProt:
G8RU44
LinkDB
All DBs
Position
2326060..2328147
Genome browser
AA seq
695 aa
AA seq
DB search
MTTREAAQALLEQLAGPAAVLRDDQWTAIEALVVGRRRALVVQRTGWGKSAVYFIAAKLL
REAGRGPTVIVSPLLALMRNQVAAAERAGVHAATINSSNVADWDEINERVHRRELDVLLV
SPERLNNPDFRDHVLPALAHDAGLVVVDEAHCVSDWGHDFRPDYRRIRTLVGELGTDVPV
LATTATANDRVVDDVAAQLGVGGRDTLVLRGGLDRESLRLSVVKAGNPAQRAAWLAAHID
SLPGSGIVYTLTVAQAHDVASLLREQGHEVAAYTGATEAAEREQLEADLLANKVKALVAT
SALGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATESAQVILLPGNEDQDVWRYFAS
VAFPSESMVRNVIGALDAERPQSTPALEPLVDLGRSRLEMVLKVLDVDGAVRRVKGGWVG
TGAAWEYDEPRYRKLDEARKREQQAMLDYQATNGCRMAFLRSQLDDPSLTPGERCGRCDN
CTGEHVSADVDSGTTEQTRQRLMRPGVEIAPRKQWPSGLAKLGVELSGKIADGPASGRAI
GRLTDLGWGARLRRVLDEPDGEVTEDLVAAAVKVLASWDWAERPTAVMALDSDRHPLLIS
SLSRALARLGRLTDLGTLRYSPTRRAVTAANSAYRVAALDGAWTAPDRDLVASAGGPVLL
VDDVADSGWTLTMAARVVRAAGAPDVLPFALASTS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgtgaggccgcacaggcgcttctcgaacagttggcgggaccggccgccgtc
ctgcgcgacgaccaatggacggctatcgaggcgctggtcgtcgggcggcgccgcgcactc
gtcgtacagcgcaccggctggggtaagtcggcggtctatttcatcgccgccaaactgcta
cgggaagccggccgcggcccgacggtgatcgtgtcgccactgctggcgttgatgcgaaac
caggtggccgccgccgagcgggccggagtgcacgccgccaccatcaactcgagcaacgtc
gccgattgggacgagatcaacgaacgtgtgcaccggcgcgagctcgacgtcctgctggtg
agcccggaacggttgaacaatcccgactttcgtgatcacgtgctccccgcactggcccac
gacgccggtctcgtcgtggtcgacgaagcgcactgcgtgtcggactggggtcacgacttc
cggcccgactaccgacgtatccgcacgctcgtcggtgaactcggtaccgacgtcccggtg
ctggccaccacggcgactgccaacgacagggtcgtcgacgacgtcgccgcccaactgggt
gtcggcggccgggacacgctggtgctgcgcggcgggctggaccgcgaatcactgcggctg
tcggtggtcaaagccggcaacccggcacagcgggcggcttggcttgcggcacatatcgat
tcgttgcccggctccgggatcgtctacacgctcaccgttgcccaggctcacgatgtcgcg
tcgctgttgcgtgagcagggccacgaggtggcggcctacacgggcgccaccgaagcggcc
gaacgagagcagctcgaggcggacctgctggccaacaaggtcaaggcgctggtcgccacg
tcggcactgggcatggggttcgacaaacccgacctcggcttcgtcgtgcacctcggtgcc
ccgtcctctccgatcgcctactaccagcaggtcggccgcgccgggcgcgccaccgagagc
gcacaggtgatcctgctgcccggtaacgaggaccaagacgtctggcgctacttcgcatcg
gtggcattcccctcggaatccatggtgcgcaacgtgatcggtgcactggacgccgaacgg
ccgcagtcgaccccggcgctcgaaccgctcgtcgacctcggacggtcccggctggagatg
gtgttgaaagtactcgacgtcgacggcgcggtgcggcgggtcaaaggtggctgggtcggt
accggcgcggcatgggagtacgacgagccgcggtaccggaaactcgacgaggcccgcaag
cgggaacagcaggcgatgctcgactaccaggccaccaacggttgccggatggcgtttctg
cgtagccaactcgacgatccttcactcacaccgggcgagcgctgcgggcgctgcgacaac
tgcacgggcgaacacgtcagcgccgatgtcgattcgggcacgaccgaacagaccaggcaa
cggctcatgcgacccggtgtggagatcgcaccccgcaagcagtggccgtcgggattggcg
aagctcggcgtcgagctgagcggcaagatcgcggacggcccggcgtccggacgcgccatc
ggcaggctgaccgatctgggctggggtgctcggctgcggcgcgtgctcgacgaacccgac
ggtgaggtgaccgaggatctggtcgccgccgcggtgaaggtgctggcgtcctgggattgg
gccgagcggccgacggcggtcatggcgctcgattccgaccgccacccgctgctgatctcg
tcgctgagccgcgcgctggcccgcctgggcaggctgaccgacctcgggacgctgcgatac
tcgccgacgcggcgggcagtgaccgcggcgaactcggcctatcgcgtcgctgcgctcgat
ggggcgtggacggcgcccgatcgcgatctcgtcgcatccgcgggcggtccggtgttgctc
gtcgacgacgtggccgacagcgggtggaccctgacgatggccgccagggtggtgcgggcg
gccggcgcgcccgacgtgcttccgttcgcgctggccagcaccagctga
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