Mycolicibacterium rhodesiae: MycrhN_2625
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Entry
MycrhN_2625 CDS
T01685
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MycrhN_2625
09124 Replication and repair
03420 Nucleotide excision repair
MycrhN_2625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrh03021
]
MycrhN_2625
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_2625
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MycrhN_2625
Transcription machinery [BR:
mrh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MycrhN_2625
DNA repair and recombination proteins [BR:
mrh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MycrhN_2625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AEV73206
UniProt:
G8RYC7
LinkDB
All DBs
Position
complement(2637974..2639623)
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAG
HDAEQVVDALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLEEVL
RNKKIAPMLGARIDDDTVQVHNSERGRVKQMLLKIGWPAEDLAGYVDGEKHPISLAQDGW
HLRDYQEMATDSFWEGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRE
LINRTSLTEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEV
HLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAP
AECIEVRVTMTDNERMLYAVAEPDERYKLCSTVHSKIAVVKSILEKHKGDQTLVIGAYLD
QLDELGTELNAPVIQGSTKTAEREALFDEFRRGEIPTLVVSKVANFSIDLPEANVAVQVS
GTFGSRQEEAQRLGRLLRPKADGGGAIFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKD
ADDLLGPAI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggccccctgatcgtgcagtccgacaagaccgtgctgctcgaggtcgaccat
gagcaggcgggcgcggcgagagccgcgatcgccccgttcgccgaactcgagcgtgcgccc
gagcacatccacacctaccgcatcaccccgctggcgctgtggaacgcgcgtgccgcgggc
cacgacgccgaacaggtcgtcgacgcgctggtgacgttctcccgctacgcggtaccgcag
ccgctgctcgtcgacatcgtcgacacgatggcgcgctacgggcgcctgcagctggtcaag
tctccggtgcacggcctgacgctggtgagcctggaccgcgcggttctcgaggaggtgctg
cgcaacaagaagatcgcgccgatgctcggcgcccgcatcgacgacgacaccgtccaggtc
cacaacagcgagcgcggccgagtcaagcagatgctgctcaagatcggttggcctgcagag
gatctcgccggatatgtggacggcgagaagcacccgatcagcctcgcgcaggacggctgg
cacctgcgtgactatcaggagatggcgaccgactcgttctgggagggtgggtccggcgtc
gtggtgctgccgtgcggcgcgggtaagaccctcgtcggcgccgcggcgatggcgaaggcg
ggcgcgacgacgctgatcctggtgaccaacactgttgcgggcaggcaatggaagcgcgag
ctgatcaaccggacgtcgttgacggaggacgagatcggcgagtactcgggcgagaagaag
gagatccgcccggtgaccatcgccacctaccaggtgatcacgcgccgcaccaagggtgaa
tacaagcacctcgagctgttcgacagccgcgactggggcctgatcatctacgacgaggtg
cacctgctgcccgcgcccgtgttccggatgaccgccgacctgcagtcgcggcgacggctt
ggcctgacggccacgctgatccgcgaggacggccgcgagggcgacgtgttctcgctgatc
gggccgaagcggtatgacgcaccgtggaaggacatcgaggcccagggctggatcgcgccc
gccgagtgcatcgaggtgcgggtcacgatgaccgacaacgagcggatgctctacgccgtc
gccgagcccgacgagcgctacaagctgtgctcgacggtgcattccaagatcgcggtggtg
aagtcgatcctggagaagcacaagggcgaccagaccctggtgatcggcgcgtacctcgac
cagctcgacgagctcggaaccgaactcaacgccccggtgatccaggggtcgaccaagacc
gcggagcgcgaagcgctgttcgatgagttccgtcgcggcgagatcccgacgctggtggtg
tccaaggtcgccaatttctcgatcgacctaccggaagccaatgttgccgtgcaggtgtcg
ggcaccttcgggtcgagacaggaagaggcgcagcggctgggccggctgttgcggcccaag
gccgacggcggcggcgcgatcttctactcggtggtgtcccgcgacagcctggacgccgag
tacgccgcacaccgtcagcggttcctcgccgaacagggctacggctacatcatcaaggac
gccgacgatctgctcggtcccgcgatctaa
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