Mycolicibacterium rhodesiae: MycrhN_3304
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Entry
MycrhN_3304 CDS
T01685
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MycrhN_3304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_3304
Enzymes [BR:
mrh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MycrhN_3304
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MycrhN_3304
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MycrhN_3304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AEV73829
UniProt:
G8RPU5
LinkDB
All DBs
Position
3304000..3304863
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AA seq
287 aa
AA seq
DB search
MPELPEIEALADHLRRHAVGLTIGRIDVSAFSVLKTFDPPIAVLHGQTVTGANRWGKYLG
VQSGDLHLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGEAPGLDLTEAGTQK
RLAVWLVDDPTQVPGIAALGPDALSLGPDDLAGVLSGNSGRIKTVITDQKVIAGIGNAYS
DEILHVAKISPFATAGKLTEAQLAALHDAMISVLADAVSRSVGQGAATLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCATCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactaccggagatcgaagcgctggccgatcatctgcgtcgtcatgccgtcgga
ctgacgatcgggcgcatcgatgtgtcggccttctccgtgctcaaaaccttcgatccgccc
atcgcggtgctgcacggccagacggtcaccggcgccaaccggtgggggaagtatctcggc
gtgcagtccggcgatctgcacctgatcacccatctgtcgcgggcgggctggctgcgctgg
tcggacaagctcgccgccgctccgctgaagccgggcaagggacccatcgcgctgcgcgtg
catctcggaacaccaggggaggctccgggtctcgacctcaccgaagccggtacccagaag
cgtctcgcggtgtggctcgtcgacgacccgacgcaggtgccgggcatcgccgcactcgga
cccgacgcgctgtcgctggggccggacgatctggcaggcgttctctccggaaacagcggg
cggatcaaaaccgtcatcaccgatcagaaggtcatcgccggaatcggcaacgcctacagc
gacgagatcctgcacgtcgccaagatctccccgttcgcgacggcgggcaagctcaccgag
gcgcagttggccgcgctgcacgacgcgatgatctccgtgctggccgacgcggtcagccga
tccgtcgggcagggcgctgcgaccctgaagggcgagaagcgctctgggctgcgcgtgcac
gcgcggacgggtttgccgtgcccggtatgcggagacacagtgcgtgaagtgtcgttcgcc
gacaagtcgtttcagtactgcgcgacttgccagaccggaggcaaagtgctcgccgaccgg
cgaatgtcgcgactactcaaatag
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