Mycolicibacterium rhodesiae: MycrhN_4079
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Entry
MycrhN_4079 CDS
T01685
Name
(GenBank) oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MycrhN_4079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_4079
03009 Ribosome biogenesis [BR:
mrh03009
]
MycrhN_4079
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MycrhN_4079
Ribosome biogenesis [BR:
mrh03009
]
Eukaryotic type
Pre-60S particles
RNases
MycrhN_4079
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEV74585
UniProt:
G8RHA5
LinkDB
All DBs
Position
complement(4071650..4072297)
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AA seq
215 aa
AA seq
DB search
MRDELVWIDCEMTGLDLSSDRLIEIAVLVTDADLNILGDGIDVVIHADDAALSSMIDVVK
DMHKRSGLTEEVRTSTVDVATAEELVLDYIRTHVKQAKTAPLAGNSIATDRGFIARDMPK
LDDYLHYRMIDVSSIKELCRRWYPRIYFGQPEKGLAHRALADIHESIRELKYYRQTAFVA
PPGPSTSEIAAVADQLGPPQDDSMDIDSAAERPSG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgacgaactcgtgtggatcgactgtgagatgaccggcctcgacctgtcgtcagac
cggctcatcgagatcgcggtgctcgtcaccgacgccgatctcaacatcctgggcgacggc
atcgacgtggtgatccatgccgacgatgccgcgctgtcgtcgatgatcgacgtggtcaag
gacatgcacaagcgatcgggtctgacggaagaggtgcggacgtcgaccgtcgatgtggcg
accgccgaagaactcgtgctcgactacatccgcacgcacgtcaagcaggccaagaccgcg
cccctggccggcaattcgatcgccaccgaccgtgggttcatcgcgcgggacatgcccaaa
ctcgacgactatctgcactaccggatgatcgacgtcagctccatcaaggagctgtgccgg
cgctggtatccgcggatctacttcggccagcccgagaagggtctggctcaccgtgcgctg
gccgacattcacgagtcgatccgcgaactcaagtactaccgccagaccgcgtttgtggca
cctcccggtccgtcgaccagtgaaatcgcggccgtcgccgaccagctcgggccgccgcag
gacgactcgatggatatcgattcggccgctgagcgtccgagcggctag
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