Mycolicibacterium rhodesiae: MycrhN_4212
Help
Entry
MycrhN_4212 CDS
T01685
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MycrhN_4212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_4212
03009 Ribosome biogenesis [BR:
mrh03009
]
MycrhN_4212
Enzymes [BR:
mrh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
MycrhN_4212
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MycrhN_4212
Ribosome biogenesis [BR:
mrh03009
]
Prokaryotic type
rRNA processing factors
MycrhN_4212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AEV74714
UniProt:
G8RJG3
LinkDB
All DBs
Position
4216835..4219645
Genome browser
AA seq
936 aa
AA seq
DB search
MADSDHSAAHTEALSEESPPAEGAQPEELNIQPQAQQPEADTAAETASVEVEPDAEPEAD
SDAASPDGDEPESRLMLETAQDAPEPASYQPLFMAPQPVRFEYDADADDDDDDDSDDDSG
SDSDDEQSDRPSGRRRRRGRRGRGRGRGEQNGDDSDDDDSDGRGGSQDSGDDSDDSDDSD
DDNDDDSAGGEAGTRRRRRRRRRKSGSGDDGENGSIDDPPNTVVHEREPRKSGRGDKSGK
DGDGEIQGISGSTRLEAKRQRRRDGRDAGRRRPPILSEAEFLARREAVERMMVVRDKVRT
EPPHEGARYTQIAVLEDGVVVEHFVTSAASASLVGNIYLGIVQNVLPSMEAAFVDIGRGR
NGVLYAGEVNWEAAGLGGQNRKIEQALKPGDYVVVQVSKDPVGHKGARLTTQVSLAGRYL
VYVPGASSTGISRKLPDTERQRLKEILREVVPAEAGVIIRTASEGVKEEDIRTDVNRLQE
RWTQIEERAAETKQKAAGAAVALYEEPDVLVKVIRDLFNEDFTGLIVSGDEAWNTINEYV
NSVAPELVPRMTKYETATADGPDVFAVHRIDEQLTKAMDRKVWLPSGGTLVIDRTEAMTV
VDVNTGKFTGSGGNLEQTVTRNNLEAAEEIVRQLRLRDIGGIVVIDFIDMVLESNRDLVL
RRLTEALARDRTRHQVSEVTSLGLVQLTRKKLGTGLIEAFSTTCPDCGGRGILLHGDPVD
STSSGGRKAETGGGRRGKRGKRGGKAEDVAVAKVPSHPAGEHPMFKAMAAANGRHEDDED
DDDDTEKTAEEVAEVDSETIREAVAESAEEDSDEDFDDADDDESDEDESDEDDIDLDDDD
DEDDDDIEVIGSDDEDSDDDSDDEDSDDEDSDDEDSDDEDSDDDEDSDDDEPDDDEPDED
DDDEFEDDEPVAVVAPAGRHRRRAAARPAGPPINED
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacagtgaccattctgcagcccataccgaagccctatcagaagagagtccgccc
gcggagggtgctcagcccgaagagctgaacatccagccgcaggcgcagcagcctgaggct
gacaccgccgcggaaaccgcgtcggtcgaggtcgaaccggatgctgagcctgaggcggac
tccgacgcggcgagccccgacggggacgagcccgaatcccggctgatgctcgagaccgcc
caggacgcacccgagcccgccagctaccagccgctgttcatggcgccgcagcccgttcgg
ttcgaatacgacgctgacgctgacgacgacgatgacgacgacagcgacgacgactccggt
tcggactccgacgacgagcagtccgaccggccgtccggccgacgccggcgccgaggacgt
cgtggccgcggacggggccggggcgagcagaacggcgacgattccgacgacgacgactcc
gacggccgaggcggcagtcaggactccggtgacgattccgacgactccgacgattccgac
gacgacaacgatgacgactctgccggcggcgaggccggcacccgccgacgccgccgccgc
aggcgccgcaagtctggctccggcgacgacggcgagaacggatccatcgacgatccgccg
aacaccgtcgtacacgagcgcgagccacgtaaatcgggccggggtgacaagtccggcaag
gatggcgacggcgagatccaggggatcagcggctccacccggctcgaggcaaagcggcag
cgccgtcgtgatggtcgtgacgcgggccgtcggcgtccgccgatcctgagcgaggccgag
ttcctcgcccggcgcgaggccgtcgagcggatgatggtcgtgcgcgacaaggtccgcacc
gaaccgccgcacgagggcgcgcgctacacgcagatcgccgtgctcgaagacggcgtcgtc
gtggagcatttcgtgacgtcggccgcgtccgcatcgctggtcggcaatatctatctcggg
atcgtgcagaacgtgctgccgtcgatggaggccgccttcgtcgacatcggccgcggccgc
aacggcgtgctgtatgcgggcgaagtgaactgggaggcagcaggtctgggcggccagaac
cgcaagatcgagcaggccctcaagcccggcgactacgtcgtcgttcaggtcagtaaggat
ccggtcgggcacaagggcgcccggctgaccacccaggtttcgctcgccggccgctacctg
gtctacgtgccgggtgcgtcgtcgaccggtatcagccgcaagctgcccgacaccgagcgg
cagcggctcaaggagatccttcgcgaggtcgtgccggccgaggcgggcgtgatcatccgc
accgcgtccgaaggggtcaaggaagaggacatccgcaccgacgtcaatcggctgcaggaa
cggtggacgcagatcgaagagcgggccgccgagaccaagcagaaggccgcgggtgccgcg
gtcgctctctacgaggagcccgacgtgctggtgaaggtcatccgcgacctgttcaacgag
gacttcaccggcctcatcgtgtccggcgacgaggcctggaacaccatcaacgagtacgtg
aattcggttgcgcctgagctcgttccacgcatgaccaagtatgagaccgctacagccgat
ggtccggacgtgttcgccgtgcaccgcatcgacgagcagctgaccaaggcgatggaccgc
aaggtgtggctgccgtccggtgggacgctggtcatcgaccgcactgaggcgatgacggtg
gtcgatgtgaacaccggcaagttcaccggttctggtggaaacctggaacagaccgtcacc
cgcaacaacctcgaggccgccgaggagatcgtccgtcagctgaggctgcgtgacatcggc
ggcatcgtcgtcatcgacttcatcgacatggtgctggaatcgaaccgcgatctggtgttg
cgccggctgactgaagctctggcgcgtgaccgcacccgccatcaggtctccgaagtcacc
tcactggggctagtgcagctgacgcgaaagaagttgggcaccgggctgatcgaagcgttc
tccacgacctgcccggactgcggtggcagggggattctgctgcacggcgatcccgtcgac
tccacgtcgtccggcggacgtaaggccgagaccggcggtgggcggcgcggcaagcgtggc
aagcgcggcggaaaagccgaagacgtcgccgtcgccaaggtgccgtcgcatcccgccggc
gagcatccgatgttcaaggcgatggccgctgccaacgggcgccatgaggacgacgaagac
gacgacgacgacaccgagaagaccgctgaagaggttgctgaagtcgattcggagaccatt
cgcgaagcggttgccgagagcgccgaggaggattctgacgaggacttcgacgacgcggat
gacgacgagtccgacgaggacgagtccgatgaggacgacatcgacctggacgacgatgac
gatgaagacgatgacgatatcgaggtcatcggctccgacgatgaggactccgacgacgac
tccgacgatgaagactcggacgacgaggactccgatgacgaggactcagacgatgaggac
tccgacgacgatgaggactccgacgacgacgagcccgacgacgacgagcccgacgaggac
gatgacgacgagttcgaagatgacgagcccgtcgcggtggtggcgccggccggccggcat
cggcgccgcgccgccgccaggcccgcaggaccgccgatcaacgaggattga
DBGET
integrated database retrieval system
