Mycolicibacterium rhodesiae: MycrhN_5094
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Entry
MycrhN_5094 CDS
T01685
Name
(GenBank) superfamily II RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
mrh
Mycolicibacterium rhodesiae
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_5094
Enzymes [BR:
mrh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MycrhN_5094
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MycrhN_5094
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
AAA_30
HVO_A0261_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEV75572
UniProt:
G8RWS4
LinkDB
All DBs
Position
complement(5176481..5179261)
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AA seq
926 aa
AA seq
DB search
MTTPPSGPLLAGFVEQLPFSLDAFQRTACEALENGQGVLVCAPTGAGKTVVGEFAVHLAL
AAGRKCFYTTPIKALSNQKHNDLVRRYGAEKIGLLTGDQSINGDADIVVMTTEVLRNMLY
ANSPALQGLSHVVMDEVHFLADRMRGAVWEEVILHLPDDVLLVSLSATVSNAEEFGGWIQ
TVRGDTTVVVDEHRPVPLWQHVMVGKRVFDLFDYRAKGAKRDDRRELLVDPELLRHIAHR
QEADRLADWQPRGRGRNRSRPSICRGPTRPDVIGTLEREGLLPAITFIFSRVGCDAAVKQ
CLRSSLRLTTNSERARIAEVIDRRCADLPEADLVILDYHEWREGLLRGLAAHHAGMLPVF
RHTVEELFVAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGR
AGRRGIDVEGHAVVLWTPDVDPAEVAGLASTRTFPLRSSFAPSYNMTINLVHQMGPAQAH
KLLESSFAQYQADRSVVGLVRGIERGERMLGEIAAELGGGPPIRQGAADAPILDYVRLRQ
QISERERAQSRASRLQRRKAANDALTALRRGDIITITQGRRGGLAVVLESDRDSDDPRPL
VLTEHRWAGRISSSDYSGASAPLGSMSLPKRVEHRNPRARRDLASALRAAAAGLDVPSGK
RRRSGEPVERDVDPELASLREQMRRHPAHQLPDREEKARLAERYLRIERDNEQIQHKVAA
ATNSLARTFDRIVVLLTERGFIDGSDDDPKVTDDGRLLARIYSESDLLVAESLRSGIWEG
LDAAELAAVLSAVLYETRGDTPTVPGGVDIPTATVRRALNQTRRLWTELRADEQRHRISH
SREPDEGFVPTIYRWASTGDLTTALAAADAGGTGSPLSAGDFVRWCRQVLDLLDQVRNAA
PTPALRSTAKRAINDVRRGVVAVDAG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccacctagcggccccctcctcgccggcttcgtcgagcagttgccgttcagt
ctggacgctttccagcggaccgcgtgcgaggcactggaaaacggacagggcgtgctggtc
tgcgcaccgaccggggcagggaagacggtggttggcgaattcgccgttcaccttgcgctg
gctgcgggccggaaatgcttctacaccacccccatcaaggcgctgagcaaccagaaacac
aacgacctggttcgccgctatggtgcggagaagatcggcctgctcaccggtgatcagtcg
atcaacggcgacgccgacatcgtcgtcatgaccaccgaagtgctgcgaaatatgctctac
gcgaattcgcctgcactgcaagggctttcacacgtagtgatggacgaggtccactttctt
gccgaccggatgcgcggcgcggtgtgggaagaggtgatcctgcacctgcccgacgacgtg
ctgctggtgagcctttcggcgaccgtgagcaacgccgaggagttcggcgggtggatccag
acggttcgtggtgacaccaccgtggtggtcgacgaacaccgccccgtcccgttgtggcag
cacgtgatggtcggcaagcgggtcttcgacctgttcgactaccgcgccaagggcgcgaaa
cgggatgaccggcgtgaactgctcgtcgatccggagttgttgcgtcacatcgcgcaccgg
caggaagctgatcggctcgccgactggcagccgcgcgggcgcggccggaaccggagtcgc
ccgagcatctgccgggggccgacacgccccgatgtgatcggcaccctggagcgcgaaggc
ttgctccccgcgatcacgttcatcttctcgcgggtcggctgcgacgccgccgtcaagcag
tgtctacggtcgtcgctgcggctcacgaccaactccgaacgcgcccgcatcgccgaggtc
atcgaccgccgctgcgctgacctgcccgaagccgacctcgtgatcctcgactaccacgag
tggcgcgaagggctgctgcgcggattggcggctcatcacgcaggcatgttgccggtgttc
cggcacaccgtcgaggagttgttcgtcgccgggctggtgaaggccgtcttcgccacggag
acactggctttgggaatcaacatgccggcgcggacggtagtgctggagcgcctggtgaaa
ttcaacggcgaacagcacatgccgttgactccgggggagtacacccagttgaccggacgc
gccggacgccggggcatcgacgtcgaaggacacgcggtggtgctgtggactcctgacgtc
gatccagccgaagtcgccgggctggcgtcgacccgtaccttcccgttgcgcagttccttt
gcgccctcgtacaacatgaccatcaacctcgtgcatcagatggggcccgcgcaggcgcac
aagctgttggagagttcgttcgcgcagtaccaggccgaccgctcggtggtggggttggtg
cgcggcatcgagcgcggcgaacggatgctgggtgagatcgccgcggagctcggcggtggg
ccgccgattcggcagggcgccgcggatgctccgatcctggactacgtgcggttgcgccag
cagatctccgaacgtgagcgggcacagtccagggcgtcacggctgcaacgacgcaaggcc
gccaacgacgcgctcaccgcgctgcgccgcggcgacatcatcacgatcacccagggcagg
cgcggcggtctggccgtcgtgctggaatcggaccgcgacagcgacgatcctcggccgctg
gtgctgaccgaacaccggtgggccggccgcatttcgtcctccgactattccggggcatca
gcgccgctggggtcgatgtcgttgcccaagcgggtcgagcaccgcaatccgcgcgcgcga
cgagacctcgcctcggcgttgcgagcggcggccgccggactcgatgtcccttcgggaaag
cgcaggcgcagcggtgaaccggtcgagcgcgacgtcgaccccgaattggcctccctgcgt
gagcagatgcgccggcatcccgcacaccagcttcccgaccgcgaggagaaggcacgcctc
gccgagcggtatctgcgaatcgagcgcgacaacgaacagatccagcataaggtcgcggcc
gcgacgaattcgctggcgcgcacgttcgaccgaatcgtcgtgctgctcaccgaacgcggg
ttcatcgacggaagcgacgacgatccaaaggtgaccgacgacggccgtctgctcgcgagg
atctacagcgaaagcgacctgctggtcgccgaatctctgcgcagcggcatctgggagggt
ctggacgcggcggaattggcagcggtgctgtcggctgtgctgtacgagacgcgcggcgac
acgccgaccgtcccaggcggtgtcgacatcccgacagccacggtgcgacgtgcgctcaac
cagacccgcaggctgtggaccgaactgcgcgccgacgaacagcgccaccgcatcagtcac
agccgcgaacccgacgaaggtttcgttccaaccatctatcgctgggcctccaccggcgac
ctcaccaccgcactggcggccgccgatgccggaggcaccgggtccccgctgtcggcaggc
gatttcgtacgctggtgccgccaagttctcgacctgctcgaccaggtgagaaacgccgca
ccgactcccgctctgcgaagcacggcgaaacgcgcgatcaacgacgttcggcgcggcgtc
gtagcagttgatgcggggtag
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