Mycolicibacterium rhodesiae: MycrhN_5631
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Entry
MycrhN_5631 CDS
T01685
Name
(GenBank) putative hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MycrhN_5631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrh03019
]
MycrhN_5631
Messenger RNA biogenesis [BR:
mrh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MycrhN_5631
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEV76099
UniProt:
G8RKX2
LinkDB
All DBs
Position
complement(5709349..5711028)
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AA seq
559 aa
AA seq
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MNEELAPPGPLVPGGLRVTALGGVSEIGRNMTVFEHLGKLLIVDCGVLFPTHDEPGVDLI
LPDLRLVQDRLDDVEALVLTHAHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREHR
IKPVFEEVDEGQSSTHGVFECEYFAVNHSIPGCLAIAIHTGAGTVLHTGDIKLDQSPPDG
KPTDLPGMSRLGDAGVDLFLCDSTNSEIPGVGPSESEIGPNIHRLMRGAQGRVIVACFAS
NVGRVQQIIDAAVALDRKVAFVGRSMVRNMGIAKELGYLTLTNNDDIIDIGAAEMMPPER
VVLVTTGTQGETMAALSRMSRGEHRSITLTPGDLIIMSSSQIPGNEEAIFGVLDALAKIG
ARVVTNAHVRVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAALAARTGVPEEN
IVLAENGVSVDLVAGRASIAGAVSTGKMFVDGLVHGDVGETVVGERLTLSSGFIGVTVVL
RSGTGKLAAAPQLHSRGFSEDPKALEPATRKVQEALETLAAEQVTDVARIAQAVRRAVGK
WVGEAYRRQPMIVPTVIEV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgaagaactcgcgccaccgggacctctggtcccaggcggactgcgggtcaccgcg
ctcggtggcgtcagcgagatcggccgcaacatgaccgttttcgagcatctgggcaaactg
ctgatcgtcgactgtggggtactgttcccgactcacgacgagccgggggtcgatctgatc
ctccccgatctgcgcctcgtgcaggaccgcctcgacgatgtggaggctctcgtgctgacc
cacgcgcacgaggaccacatcggcgccatcccgttcctgctcaagctgcgccccgacatc
ccggtggtcggttcgaagttcacgttggcgctggtggcggagaagtgccgcgaacaccgc
atcaagccggtgttcgaggaggtcgacgagggccagagctccacgcacggcgtcttcgaa
tgcgaatacttcgccgtcaaccactccattcccgggtgtctcgcgatcgcgattcacacc
ggcgcgggcacggtgctgcacaccggcgacatcaagctcgatcagtcaccgcccgacggt
aaaccgaccgacctgccgggcatgtcacggctcggcgacgccggagtcgatctgttcctc
tgcgattcgacgaactccgagatccccggcgtcggtccctcggagagcgagatcggcccg
aacatccaccggctgatgcgcggggcgcaggggcgggtgatcgtggcctgcttcgcatcc
aatgtcggtcgcgtgcaacagatcatcgacgccgcggtcgcgctggaccgcaaggtggct
ttcgtcggacggtcgatggtccgcaacatggggatcgccaaggagctcggctacctgaca
ctgaccaacaacgacgacatcatcgacatcggcgcggccgagatgatgcctcccgagcgg
gtggtgctggtgaccaccggcacccagggcgaaacgatggccgcgctgtcgcggatgtcg
cgcggcgagcatcgcagcatcaccttgacccccggcgacctcatcatcatgtcgtcgtca
cagatcccgggcaacgaggaggcgatcttcggcgttctcgatgcgctggcgaagatcggt
gcccgcgtcgtgacgaacgctcatgtgcgggtgcatgtgtcggggcacgcctatgccggt
gaactgctcttcctgtacaacggcgtgcggccacgcaacgtgatgccggtgcacggcacc
tggcgtatgttgcgggccaacgcggcgctggcagcacgcacgggcgtgccggaggagaac
atcgtgctggcggagaacggtgtcagcgtcgacctggtcgcgggccgtgcgtcgatcgcc
ggtgcggtgtcgacgggcaagatgttcgtcgacgggctggtccacggcgatgtcggcgaa
accgttgtcggagaacggctgacgctgtcttccgggttcatcggcgtgacggtggtgctg
cgcagcggcaccggcaagttggcggccgcgccacagctgcactcgcgcggcttctccgag
gatcccaaagcgctggaacccgccacccgtaaggttcaggaagcactggaaacgcttgcc
gccgaacaggtcaccgacgtcgcccggatcgcccaggccgtccggagggcggtgggcaag
tgggtcggcgaggcctatcgccgccagccgatgatcgtgcccacggtcatcgaggtctag
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