Mycolicibacterium rhodesiae: MycrhN_5867
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Entry
MycrhN_5867 CDS
T01685
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mrh
Mycolicibacterium rhodesiae
Pathway
mrh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MycrhN_5867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrh03400
]
MycrhN_5867
Enzymes [BR:
mrh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MycrhN_5867
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MycrhN_5867
DNA repair and recombination proteins [BR:
mrh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MycrhN_5867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TackOD1
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AEV76332
UniProt:
G8RPA3
LinkDB
All DBs
Position
complement(5945239..5946129)
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVEVVRRGLDAHVVDKTISAVRVHHPRAVRRHEAGPADLTARLLNSRIVGTGRRG
KYLWLTLDDGCALVVHLGMSGQMLIGAPTSARARRGQREPREDHLRIAALLDDGTALSFV
DQRTFGGWMLADVVTVDGTEVPMPVAHIARDPLDPDFNRDGVVTVLRRKHSEIKRQLLDQ
TVVSGVGNIYADEALWRAKINGARLASSLTRAKLGEVLDAATDVMTEALGQGGTSFDSLY
VNVNGESGYFERSLDAYGREGEPCRRCGAVMRREKFMNRSSFYCPKCQPRPRVRHS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttcccgaagtcgaggtcgttcgtcgggggctggatgcgcacgtcgtcgac
aagaccatcagcgccgtccgggtgcaccacccgcgcgcggtgcgcaggcacgaggccggg
cccgccgatttgactgcgcgcctgctgaattcgcggattgtcggcacgggacgacgaggc
aagtacctgtggctgacgctcgatgacggctgcgctctcgtcgtccatctcggcatgagc
gggcagatgctcatcggggcgccgacgagcgctcgcgcgaggagaggacaacgtgagccg
cgggaggaccacctgcgcatcgctgcgttgctcgacgacggcaccgcgttgagttttgtg
gaccagcgcacgttcggcggctggatgctcgccgacgtcgtcacggtcgacggcaccgaa
gtcccgatgcccgtcgctcacatcgcccgcgaccccctcgatcccgacttcaatcgcgac
ggcgtcgttaccgtgttgcggcgcaagcactccgagatcaagcgtcagctgctggaccag
acggtcgtgtcgggcgtcggcaacatctacgccgacgaggcgctgtggcgcgcgaagatc
aacggcgcccggctggcgtcgtcgctgacgcgggcgaagctgggtgaggtgctcgacgcc
gccaccgatgtgatgaccgaggcgctgggccagggtgggacgtcgttcgactcgctgtat
gtgaacgtcaacggtgaatcgggctatttcgagcgatcgctggacgcctacggccgcgaa
ggtgaaccgtgccggcgctgcggcgcggtgatgcgacgggagaagttcatgaaccgctcg
tcgttctactgcccgaaatgccaaccgcgcccacgagtccgacactcgtag
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