Marinomonas rhizomae: KDW99_00470
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Entry
KDW99_00470 CDS
T08610
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi00550
Peptidoglycan biosynthesis
mrhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDW99_00470 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mrhi01003
]
KDW99_00470 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrhi01011
]
KDW99_00470 (pbpC)
Enzymes [BR:
mrhi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KDW99_00470 (pbpC)
Glycosyltransferases [BR:
mrhi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KDW99_00470 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
mrhi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KDW99_00470 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
PBP1c_linker_2
PBP1c_linker
PBP_1A_C
Motif
Other DBs
NCBI-ProteinID:
UTV99654
LinkDB
All DBs
Position
complement(108445..110733)
Genome browser
AA seq
762 aa
AA seq
DB search
MALLNSRFRLWVCLPIAGILLFLSFLLFDKLVPVDLESRSLSQTVLAEDGSILRNFADEN
GVWRFPVTLDEVSPNYLEALITYEDQYFYDHPGVNLFALTRATWQWISTGDIVSGGSTLT
MQVARIRYPEPRTVWGKLKEIVRALQLEWHFSKADILTYYLNHAPFGGTYEGIQAASLGY
FGHKVKQLTDAQAALLAVLPQAPSYYRPDRHNERAQQARNKLMRRLVTLEEWSTERLNDA
LIEDIPTITKQDYQSAPLLARRLVTQSTAPQIKTFIHSQWQGQISNLLRNYVHGIGQKVS
AAALVVENETGKVKVYAGSADFNDSSRFAYVDMVQATRSPGSTLKPFIYGMALDEGLIHS
ESLLMDVPLKFGDYQPDNFNGGVSGPVSVTHALQKSLNIPAVQVLEQLKPIYFFLKMKKA
GIELKLPIGAKPNLAVALGGVGSDLEDLVYAYTSLGNKGQAQQLRFSPTDPQSQQPLLSE
GAAWVIRKILLDNPDSVSGLAVKTGTSYGFRDAWAIGVSQHYTLGVWIGRPDGVPMPGHY
GQVTAVPLLNNIYQRLNDQRPAPQMPDSVSKVDICWPQGDVVKTDCEESHSAYIVDGTIP
KTWYNTAALEQPFNQAEFQFWQANDSKLRVNISCQVEAKRQKATVWPAPLDNWLTPEQHR
SSRIPSWDPRCETTGNIIRQSAVRIHGLTDQDAFQLPKQQNRNIRISAEGGEAPFYWFLN
GVLLPDQQRQTTLKDLTSGNYQLTLIDQAGSRDQVDFSVLLY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttgaatagtcgattccggttatgggtttgtttgcccatcgccggaatactg
ttgtttttgtctttcttgttattcgacaagcttgtgccagtcgacttggaatcccgctcg
ttgagccaaaccgttcttgctgaggatggttcgattttacgtaattttgctgatgaaaac
ggcgtgtggcgctttccggtaacattagacgaggtttccccaaactacctcgaagcgctc
attacttacgaagatcaatacttttatgatcatcccggtgttaatctttttgcgctcact
cgcgccacttggcaatggataagcacaggcgacatcgtctctggcggctcaaccttgacc
atgcaagtggctcgcatacgttacccagaacccagaaccgtatgggggaaactcaaagaa
atcgtccgtgctctgcaattagagtggcattttagtaaagcagacatactcacctattat
ctcaaccatgcgccctttggtggcacctacgaaggcattcaagccgcttccttgggttac
tttggtcataaggtgaaacaactgacagacgcccaagcggctcttttggcggttttgcca
caagcacccagctattaccgaccagatcgacataacgaacgcgcccagcaagctaggaac
aagttgatgcgccgtttagtaacactggaagagtggtcaacagagcgcttaaacgacgca
ttaatcgaagacattcccaccataaccaaacaagactaccaatcggcgccattgctcgcc
cgccgattggtaacacaaagcactgcacctcagatcaaaacctttatccactctcaatgg
caaggccagatcagtaacctactgagaaattatgtccatggaattgggcaaaaagtctcg
gctgcagccttggttgtcgaaaacgagacaggcaaggtaaaagtctacgcaggatcggcg
gatttcaatgacagcagccgtttcgcttatgtggatatggttcaggcaacccgatcacca
ggttcaacactgaaaccctttatttatggtatggcattggatgaaggcttaattcatagc
gaaagcttattaatggatgtgccgcttaagtttggagactatcaacccgacaattttaac
ggtggcgtcagtgggccagtctctgtcacccatgctctgcaaaaaagcttaaatattcct
gccgtacaagttctggagcagctcaagccgatttactttttcttaaaaatgaaaaaagca
ggcatcgagctgaaactcccgatcggggcaaagcctaatctggcagtggctctcggtggc
gttggctctgacttagaagatcttgtctatgcttacaccagccttggaaacaaaggccaa
gcacaacaactgcgctttagtcctaccgacccacaatcacagcaaccgcttttgagtgaa
ggcgctgcttgggttattcgaaaaatattattagataatccagattctgtttctggcttg
gcggttaaaaccggaacaagctatggattccgtgatgcctgggcgattggagtgagccag
cattacaccttaggcgtttggattggccgacccgatggtgttcccatgccaggccattac
ggccaagtcaccgctgtgccgttattaaacaatatttatcaacggctcaatgatcaacgt
ccagccccacaaatgcccgacagcgtgtctaaagtagacatatgttggccacaaggtgac
gtggttaaaacggattgcgaggaaagccacagcgcttatatcgtcgatggcaccattcct
aagacttggtacaacacagcagcgctagagcagccattcaaccaagcagaatttcaattc
tggcaagcgaatgattccaagttacgggtcaatatcagctgtcaggtcgaagccaaacgc
caaaaggccaccgtttggcctgcccccttagataattggctaacacctgaacaacaccga
tcttcccggattccgagctgggaccctagatgtgaaacaacaggcaatatcattcgccaa
tcagcagtccgtattcatgggctcaccgatcaagatgcgtttcagctacctaagcaacaa
aatcgcaatatccgtatttcagccgaaggaggcgaagcgcctttctactggtttttaaac
ggtgttttgttaccagaccagcaaagacaaaccaccttaaaagacctaacgtccggtaat
tatcaactcacgttaatagaccaagcgggctcaagagaccaagtcgacttctcggttctt
ctctattag
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