Marinomonas rhizomae: KDW99_00645
Help
Entry
KDW99_00645 CDS
T08610
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrhi03000
]
KDW99_00645
Transcription factors [BR:
mrhi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
KDW99_00645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_23
HTH_IclR
HTH_7
HTH_24
Sigma70_r4_2
HTH_3
HTH_38
HTH_28
HEM4
Sigma70_r4
HTH_5
MarR
HTH_11
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
UTV99688
LinkDB
All DBs
Position
complement(156547..157557)
Genome browser
AA seq
336 aa
AA seq
DB search
MSIKEIATQLDLSVSTVSRALNDYPDISPSTKKRVLKEAARQGYQLKGPEMAHWVQAKRV
ITAIIPCQDTQYLDPILSKVLAGTRQALQAAGYLLQVVAIDTGKQELSEFERLVKAGDQD
GFLLLRTRVNDPKVHRLLKLNVPFVCYGRTERAAQFAWLDLDNYQVGHLSLSRLHEQGHS
KIGVVSVSERYFFAQERRRGIQNAAEQIGLSLASEQWLEVGYDEEESYLACAEFLLQHPD
ITALICLTSTSARAAALAAMRLHNTQLNERENPVCVIGCDTPADELTASMGITSIQQAPP
TQIGEQLAQMMVARIKGTPVKDLQVVLVPGVVTIGL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattaaagagatagcaacccagttggatctgtcggtatccacggtgtcacgagcg
ctgaacgattacccagacattagcccgagtacaaagaagcgagtgctaaaagaagcagcg
cgacagggctaccaattgaaagggccagaaatggctcattgggtgcaagcaaaacgtgtg
attacggcaatcattccttgccaagacacacaatatctcgaccccattctttcgaaggtg
ttagctggaactcgacaagcgctgcaagcagcaggctatttgctgcaagtggtggcaatc
gatactggcaaacaggagttaagcgagtttgaacgcctagtaaaagcaggcgatcaagac
ggttttctgctccttcgcactcgggttaacgacccgaaagtccatcgtttactgaaactt
aacgtaccttttgtgtgttacggacgcaccgagcgcgcggcgcaatttgcttggctcgat
ttggataattaccaagttggtcatttaagcctgagtcgtctgcacgaacaaggccacagc
aagattggcgtggtatcggtaagcgagcgatatttcttcgcccaagaaaggcgacgcggg
attcaaaatgccgccgagcaaattgggctttctcttgcgtctgaacaatggttagaagtg
ggctatgacgaggaagaaagttacctcgcttgtgccgaatttctgctccagcacccagat
atcaccgcgttgatttgcctaaccagcaccagcgcgcgtgccgccgcattggcggccatg
cgattgcacaacacacagctaaatgaaagagaaaatcctgtgtgtgtaattggttgtgat
acacccgcagatgagctgaccgccagtatggggattaccagcattcagcaagcgccgcca
acgcaaatcggtgaacagcttgcccagatgatggtagcgcgcatcaaagggactccggtg
aaggacctacaagtcgttttagttccgggggttgtgacgataggactttaa
DBGET
integrated database retrieval system
