Marinomonas rhizomae: KDW99_01150
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Entry
KDW99_01150 CDS
T08610
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03030
DNA replication
mrhi03410
Base excision repair
mrhi03420
Nucleotide excision repair
mrhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDW99_01150 (polA)
03410 Base excision repair
KDW99_01150 (polA)
03420 Nucleotide excision repair
KDW99_01150 (polA)
03440 Homologous recombination
KDW99_01150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrhi03032
]
KDW99_01150 (polA)
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_01150 (polA)
Enzymes [BR:
mrhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDW99_01150 (polA)
DNA replication proteins [BR:
mrhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KDW99_01150 (polA)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KDW99_01150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDW99_01150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
WHD_BrxR
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTW01510
LinkDB
All DBs
Position
complement(278075..280810)
Genome browser
AA seq
911 aa
AA seq
DB search
MILVDGSSYLYRAFHAIPPMHTSDGHPTNATRGVISMIRSLIKTYPDSPMVIIFDAKGKT
FRDEIYSEYKAHRPPMPDDLRPQIEPIHRMVEAMGLPLVIIDNVEADDVIGTIAKQVGEA
GREVVVSTGDKDMAQLVTDKVTLVNTMNNTVMDIQGVKDKFGIPPELIIDYLALMGDKVD
NIPGVPGVGEKTALALLQGLGCIKDIYTRLDEIADLGFRGSKTMKQKMEDNKEMAELSYT
LATIKCDVELPFEPQELKNGEADKEKLREWFTKMEFKTWLSDLDKAPSVETASDTVGNDG
QVETPVKSNLEANYETILDKTSFNKWLEKIQAAELVAFDTETTSLNYMAAELVGLSFSVE
VGEAAYVPMAHDYEGAPEQLDRAWVLEQLKPWLEDDNQAKVGQHLKYDANVLNNYDITLR
GIAYDTMLESYVYNSVSSRHDMDTLASKFLGHTNVSFEDIAGKGAKQKTFNQIDLEVAAF
YAAEDADITLRLHQAIWPKIETTPELVSIFKDIECPLIPVLAKMEQTGALIDPELLHLQS
TEIAGKLQELEIKAHEEAGESFNLSSPKQLQVILFEKQGLPVIKKTPKGQPSTAEPILQE
LAQDYELPRLIMEHRSLSKLKSTYTDKLPEMIQKTGRIHTSYHQAITATGRLSSTDPNLQ
NIPIRSAEGRRIRQAFIAPAGYKLVAADYSQVELRIMAHLSQDPGLLDAFTKDADVHKAT
AAEVFEVSLDDVTSEQRRRAKAINFGLIYGMSAFGLAKQLGIGRPEAGKYIKRYFERYPG
VQQYMENTRESAKEKGYVETIYGRRLYLPDIKAKNAMMRQAAERTAINAPMQGSAADIIK
RAMIKMHDWLAETDLDVKMIMQVHDELIFEVAEKDLEKAQAKIVDIMQNSSQIDVPLLVE
AGVGDNWDEAH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgatcttggtagacggttcgtcttacctttaccgagcattccacgcgattccacccatg
cacaccagcgacggtcacccaaccaacgccacgcgcggtgtgatcagcatgatccgcagc
ctaatcaaaacctacccagattcgccaatggtgatcatcttcgacgctaagggtaaaacc
ttccgtgacgagatctacagcgaatacaaagcccaccgtccaccgatgccggacgactta
cgtccgcaaatagaaccgattcatcgcatggtggaagccatgggcttgccgctggtgatc
atcgataatgtagaggcagacgacgtgatcggtaccatcgccaaacaagtgggcgaagcg
ggtcgcgaagtggtggtttccaccggcgataaagacatggcacaactggttaccgacaaa
gtcacccttgtgaacaccatgaacaacaccgtcatggacatccaaggtgtgaaagacaaa
ttcggcattccgccagaactgatcatcgattacctcgcgctgatgggcgataaagtcgat
aacattccgggcgtaccgggcgtaggcgaaaaaaccgcccttgctttactacaaggtttg
ggctgcatcaaagacatttacacccgcctagacgagatcgctgacttgggttttcgtggt
tccaaaaccatgaagcaaaaaatggaagacaacaaagagatggccgagctgtcttatacc
ttggcgaccatcaaatgcgacgtagaactgcctttcgaaccacaagaattgaaaaacggc
gaagccgacaaagaaaagctgcgtgaatggttcaccaagatggaattcaaaacttggttg
tccgacctagacaaagcgccaagcgtagaaaccgcaagcgacacggtcggcaatgatggc
caagtagaaacaccggtaaaatccaatctcgaagccaactacgaaaccatcttagacaaa
acaagcttcaacaaatggctagaaaaaatccaagccgctgagcttgtcgccttcgacacg
gaaaccacctcgcttaattacatggctgcagaactggttggcttgtccttctcggtagaa
gtcggcgaagccgcctacgttccgatggcgcacgactatgaaggcgcgccagaacagcta
gatcgcgcttgggtgctagaacaactgaaaccttggctcgaagatgacaaccaagcgaaa
gtcggccaacatctaaaatacgacgccaacgtgctaaacaactacgacatcaccttacgc
ggcatcgcttacgacaccatgttggaatcttacgtgtacaactccgtgagttcacgtcac
gacatggacacccttgccagcaagttcctcggccacaccaatgtgagctttgaagacatt
gcaggcaaaggcgccaagcaaaaaacctttaaccaaatcgacttagaagtcgccgcgttt
tatgcggcagaagacgccgacatcaccttgcgtttgcatcaagccatttggccgaaaatc
gaaaccacgccagaactcgtcagcatttttaaagacatcgaatgcccattgattccagta
ttggcgaaaatggaacaaactggtgccttgatcgacccagaactcttgcacctgcaaagc
actgaaatcgccggcaagctgcaagaactggaaatcaaagcccacgaagaagcgggcgaa
agcttcaacctaagctcgccaaaacagctacaagtcatcttgttcgaaaaacaaggcttg
cccgttatcaaaaaaacgccaaaaggccagccatcgaccgccgaaccaatcttgcaagaa
ctggcgcaagactacgaactgcctcgcttgatcatggaacaccgcagcctgtctaagttg
aaatccacttacacagacaaactgccagagatgatccagaaaaccggccgcattcatacc
tcgtaccaccaagccattaccgcgacaggtcgtttgtcgtcgactgatccgaacttgcag
aacatcccgattcgttctgctgaaggtcgccgcattcgccaagcttttatcgcacctgct
ggctacaaactggtcgcggccgactactcacaagtcgaattacgcatcatggcgcacctg
tcgcaagatccgggcttattagacgctttcacaaaagacgccgacgtgcacaaagccacc
gccgcggaagtcttcgaagtcagcttagacgacgtcaccagcgaacaacgccgccgcgcc
aaagccatcaacttcggcttgatctacggcatgtccgcctttggcctcgcgaaacaactt
ggcattggtcgcccagaagcaggcaaatacatcaaacgctacttcgagcgttacccaggc
gtacagcaatacatggaaaacacccgcgaaagcgcgaaagagaaaggctatgtagaaacc
atctacggccgtcgtttgtacttgccagacatcaaagcgaaaaacgccatgatgcgccaa
gccgccgaacgcaccgcgatcaacgccccgatgcaaggctccgccgccgacatcatcaaa
cgcgccatgataaaaatgcacgactggctcgctgaaaccgacctagacgtgaaaatgatc
atgcaagtacacgatgaactcatcttcgaagtggccgaaaaagacctagaaaaagcccaa
gcaaaaatcgtcgacatcatgcagaacagtagtcagattgacgtgcctttacttgttgag
gctggggttggggataattgggatgaggcgcattag
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