Marinomonas rhizomae: KDW99_01810
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Entry
KDW99_01810 CDS
T08610
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrhi03000
]
KDW99_01810
Transcription factors [BR:
mrhi03000
]
Prokaryotic type
Helix-turn-helix
Other families
KDW99_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
Mg_chelatase
AAA_2
AAA_5
HTH_8
AAA_3
HTH_7
PAS
HTH_22
HTH_29
PAS_8
nSTAND6
HTH_30
nSTAND3
Phage_NinH
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UTV99911
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Position
415688..417706
Genome browser
AA seq
672 aa
AA seq
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MQDEEEQKQQQSAAASASIDSGSETNLTQTHKERIQASWYRCEQFGLDHSSRPDFATLPK
GSLTDLIDQHRSLLETTENEVLPYYENILSNSACMIVLADRQGHVLNTWGQPRFGSAAQH
GLVGGNQWTEMGVGTNAIGTALITGEAIQVGRDEHFLRANRFMVGSASPIYNTKNDLVGV
LDISSDAYLPQDHTFGMVKLMSLSVENRLIFSAFQQEHFILSFNTNVVSLDSHWSGILVL
DENGTIVSANRRAEVVLAQDLALLNINQIFDIEMREIKHHPFSLPMKLIAMGRYQFYVKV
IPPVQQIMRIPDFRQRADYVAPSQPEAIVMNEKNPPVEKVKKPEILSSKAIPDNVIPLAE
LQHGDDRVERLVRQAHKIMEKDIPILIHGETGAGKEIFVRSLHYHSSRAKEMLVAVNCAA
IPAELVESELFGYEKGAFTGAQNRGSIGLIRRAHHGTLFLDEIGEMPMAVQSRLLRVLQE
RVVTPLGSTEAFPVDIKLISATNRILKEEVKEGRFRQDLYYRISGLNIELPALRERTDKA
ALIKYLHERLRKEEPGPALSQAMLDLLVTHPWPGNMRQLAHVLKVGMAMADEEELEEWHL
PDDFFDDLDAMGQVDDSTSSKAASEQDEPLEDLIPRLLNEFKGNVSQTAKTAGVSRNTVY
KYAKLKDENDSM
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgaagaagaacaaaaacaacaacaaagtgccgccgcatctgcctccatagac
tctggatcggaaacgaatttgacgcaaactcacaaggagcgaattcaagcgtcttggtat
cgttgcgagcaatttggcttggatcacagcagtcgacccgatttcgcgaccttgccaaaa
ggttcgttaacagatctgatagatcagcatcgtagcttgctcgaaaccacagaaaacgaa
gtgttgccgtattacgaaaatattctgagcaattcagcttgtatgatcgttttagcggac
cgccaaggtcatgtattgaacacttgggggcaaccgcgttttggcagtgctgcacagcat
ggtttggtaggcgggaaccaatggaccgaaatgggcgttggcaccaatgcgattggtacc
gctctgattactggcgaagcgattcaagtgggtcgagatgaacacttcttacgtgctaat
cgttttatggttggctcggcatcgcctatctacaacaccaaaaacgatttggttggtgtg
ttggacatctcctcagacgcgtatctgcctcaagatcatacttttggcatggtcaaactt
atgtcgttgagtgtggagaatcgcctgatcttttccgccttccagcaagagcattttatt
ctcagttttaataccaatgtggtcagtttggacagtcattggtctggtattttggtgctg
gatgaaaacggtacgattgtctctgctaaccgtcgtgcggaagtggttctcgcgcaggac
ttggctttgctcaacattaatcaaatatttgatatcgaaatgcgtgagatcaaacatcat
ccttttagtttgccgatgaagttgattgccatggggcgttatcagttttacgttaaagtg
attcctcccgtacagcaaatcatgcgcataccagactttcgtcagcgagcagattatgtt
gcaccatcacagccagaagctattgttatgaatgaaaaaaatccacccgttgaaaaggtg
aagaagccggaaatactgtcgtctaaagcgattccagataacgtcattccattggctgaa
ttacaacatggcgacgatcgagtcgagcgtttagtgcgccaagctcataagattatggaa
aaagatattcctatcttgattcatggtgaaacgggtgctggtaaagagatatttgtacgc
agtttgcattatcacagctcccgcgccaaagagatgttggtggcggtaaattgcgcggct
attcctgctgaattggtggagtctgaactttttggttatgaaaaaggcgcttttactggt
gcgcaaaatcgaggctccattggtctgattcgtcgcgcccatcacggcacattatttctt
gatgaaattggtgaaatgcccatggcagtgcagtcgcgtttattgcgagttttgcaagaa
agagtggtcacgccattgggttctaccgaagcctttccggtggacattaaactgatttcc
gccaccaatcgcatcttaaaagaagaagtgaaagaagggcgttttcgccaagatttatac
tatcgaatttcaggtttgaacatagagctacccgctttgcgtgagcgcactgacaaagcg
gcattgatcaaataccttcatgagcgtttacgcaaagaagaaccaggcccagctttgtcg
caagctatgttggacttactggtgacgcatccatggccgggaaacatgcgccaactcgct
catgtattaaaagtcggcatggcaatggccgatgaggaagagctagaagaatggcattta
cctgatgatttctttgatgacctcgatgccatggggcaagttgatgattcaacatcatca
aaggcggccagtgaacaagatgaaccgttagaagacttgatacctaggctgttaaatgaa
ttcaaaggcaatgtctcgcaaactgccaaaaccgctggagtgagccgcaatacggtttat
aagtatgcaaagttaaaagacgaaaatgattctatgtag
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