Marinomonas rhizomae: KDW99_03135
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Entry
KDW99_03135 CDS
T08610
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
KDW99_03135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
S1_RRP5
YqgF
CLZ
Motif
Other DBs
NCBI-ProteinID:
UTW00155
LinkDB
All DBs
Position
684798..686960
Genome browser
AA seq
720 aa
AA seq
DB search
MNSISDNLRIEFSILKKYSDNIIQLFEEGATVPFIARYRKENTGGMSDMDLRSFYDRWQY
LVELKKRKESILALLAGDTNVSDTIRKKIQSAVSKNELEDLYSPFKKTRKTKADEAREQG
LQPLAALIWSGQRSDTLSAIDAWCKQHNIVLSAESALEGATEILNEAIANDSEVLKKGRA
ILLKDGLLTSRVLRGKKEQGEKFRDYFDYQEAIIKVPSHRLLALFRGKKESILKLSVSLK
NEQNYPDTLILPHLNSLLDASLPESHRVTPLQRKYLNHAWENKLLPKLETDVLSQLKERA
EEGAIQVFADNLQDLLMAAPAGAYRVLGVDPGFRNGVKLAVIDEQGSLLDHGVIYPHGPQ
NRTQEASAVLSKLIHKHGIGWVAIGNGTASRETEALVKALISESNLDCRAVVVSEAGASV
YSASPIAIQEFPDLDVTIRGAVSIARRFQDPLAELVKIDPQAIGVGQYQHDVKAALLSKS
LANVVEDCVNRVGVDINLASVSLLSYVSGLTNRLAQNIVDYRQQKGRIESRSELLKIKGI
GDKSFEQCAGFLRILNGKEALDQSGVHPESYPLVQKMAAQLKLKAHDLLNNSGALQQLKL
SAPSFAQAGDFTYTDILNELAKPGRDPRPEFRYASFDHSVQKLEDVHEGMELEGVVTNVA
AFGAFVDLGVHQDGLIHISQLADRFVKDPRDLVRVGQVVKVTVLEVDVQRKRIALKANGL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatatcagataacttaagaatagagttttctatattaaaaaaatacagcgac
aatattattcaattattcgaagaaggcgcaaccgttccattcattgcgcggtatagaaaa
gaaaatacaggcggcatgagcgatatggatttgcggtctttttacgatagatggcaatac
ttagtcgaattaaaaaaacgtaaagaaagcatccttgcgttattagcaggcgatacaaat
gtctcagacaccataagaaaaaaaatacaaagcgctgtctctaaaaatgaattggaggat
ttatactcgccctttaagaaaacccgtaagacaaaagcggatgaggctagagagcagggg
cttcagcctctggctgcgttaatatggtccggccagcgctctgataccttgtccgcaatc
gacgcttggtgtaaacagcataatattgtcctgtcggcagagtctgccttagaaggggca
actgaaatattgaatgaagcaattgctaatgacagcgaggttctaaaaaagggtcgtgca
atattgctcaaagacggtcttttaaccagtagggtgctgcgaggtaaaaaggagcaaggt
gaaaaatttagagattattttgattatcaagaagcgataattaaagtgccttcccatcgt
ttgcttgcgctctttcgaggaaaaaaagagtcgatattaaaattaagtgtttccctaaaa
aatgagcaaaattatccagatacattaattcttccccaccttaattcattgcttgatgca
agtttgccagaatcccatcgagtaacgcctttgcagcgtaagtatttaaatcatgcttgg
gaaaataaacttctacctaaactagaaacagatgttctttctcaattgaaagagcgggca
gaagaaggcgctattcaggtttttgctgataatttgcaagacttattaatggctgcaccg
gctggcgcttatagagtattgggtgttgatccaggctttcgtaacggcgttaagttggcc
gttatcgacgaacagggctctttactggatcacggtgttatttatcctcatgggcctcaa
aatcgcacacaagaagccagtgcagtgctttctaagctgatacacaagcatggcattggt
tgggtggcgattgggaatggaacggcatcacgagaaacagaagcactagtcaaagcgctc
attagcgaatcgaatttagattgccgagctgtggtggtcagcgaagcgggtgcgtctgtc
tattcggcgtcacccatcgcaatacaagaatttccagatttagatgtcactattcgaggt
gctgtgtctattgctcgtcgttttcaagatccccttgctgaattagtgaaaattgaccct
caagcgattggcgttggtcagtaccagcatgacgtcaaagcagccttgttgtctaagtca
ctggcaaacgtggtggaagattgcgtaaaccgcgttggggtggatattaacctcgcctcg
gtatccttactgtcttatgtttctgggctaaccaatcgattagcgcaaaatatcgtggat
tatcgccagcaaaaagggcgaatcgaatccagaagtgagctattgaagataaaaggcatc
ggtgataaaagcttcgagcagtgcgcaggctttttaagaatactcaatggcaaagaagcc
ttagaccagtctggcgtgcaccctgaatcctatccattggttcaaaaaatggccgcgcaa
ctaaagttaaaagcccatgacttgcttaataatagcggcgctttgcagcagttaaagttg
tcggcaccaagctttgcccaggcaggcgattttacttatacagacatacttaatgaactt
gccaagcctggccgagatccaaggcccgagtttcgttatgcgtcttttgatcacagcgtg
caaaagctggaagatgtacacgaaggcatggagttagaaggcgttgtgaccaacgtggca
gcatttggcgcctttgtagacttaggagtgcatcaagacggattgattcatatctcgcaa
ttggccgatcgatttgtcaaagacccaagagatctagtgcgagtagggcaagtagtcaag
gtcaccgtgttagaagtggacgtacaacgtaagcgcattgccctgaaagcgaatgggctt
tga
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