Marinomonas rhizomae: KDW99_03485
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Entry
KDW99_03485 CDS
T08610
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_03485 (radA)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KDW99_03485 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
RecA_N
nSTAND_NTPase5
AAA_22
ABC_tran
SLFN-g3_helicase
GvpD_P-loop
nSTAND3
AAA_16
AAA_14
AAA_24
AAA
AAA_30
NTPase_1
DUF6549
AAA_29
cobW
Zeta_toxin
Rad51
AAA_5
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UTW00220
LinkDB
All DBs
Position
complement(767101..768489)
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AA seq
462 aa
AA seq
DB search
MAKAKTAFVCNECGADYAKWQGQCQACSAWNSLSEIRLTSGKTSARVSASQDPRYQGYAG
AVTGIQNLSDVDLGDVPRFSSGANEFDRVLGGGLVPGGVVLIGGHPGAGKSTLLLQTMCW
LAQQQSALYVTGEESLQQVAMRAQRLGLPTQNLKMLSETNVEAILTIAQQVKPKVMVIDS
IQVMHLDGVESAPGSVSQVRESAAVLTRFAKQTQTAVLLVGHVTKDGSLAGPKVLEHMVD
CSVLLEGSEDSRFRTLRGMKNRFGAINELGVFAMLENGLKEVKNPSSIFLNRSNHPAAGS
LVMVVWEGTRPLLVELQALVDDSALGNPRRVTVGFDHNRLAMLLAVLHKHGGLLTSDQDV
YLNVVGGVKVLETSADLAAIAAVVSSFRDRVLPHDLVVLGEVGLSGEIRPVPSGQERISE
AAKHGFTRAVVPKANCPKKPIEGMKVIGVDRLSEALDAIFED
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaaaaaccgcttttgtatgcaatgaatgcggagctgactacgcaaaatgg
caagggcaatgccaagcctgcagcgcatggaactccctatccgaaatacgccttacctct
ggtaagacctctgctcgcgtttccgccagccaagatccacgttatcaaggttacgctggt
gcggtaacgggcatccagaatttatccgatgtagatttaggagatgtacctcgctttagc
tccggagcaaacgaattcgaccgagtattaggcggcgggttagtccccggtggtgtggtg
ctgattggcggacatcctggtgcaggtaaaagtactttactactgcaaaccatgtgttgg
ctcgcgcagcaacaaagtgctttgtacgtgacaggtgaagaatcccttcaacaagtcgcc
atgcgagcacaacgccttggtctgccaacgcaaaacctaaaaatgttgtcagaaaccaat
gtggaagcgattttaaccatcgcccaacaagttaaacctaaagtcatggtgatcgactcg
atccaagttatgcatttggatggcgtagaatcggctcccggcagtgtgtcacaagtacga
gaaagtgccgcggttttaacacgcttcgccaaacaaacccaaacagcggttttgcttgtc
ggtcacgtgaccaaagacggttctttggccggaccaaaagtacttgaacacatggtggat
tgctctgttttgctggaaggctcagaagactcgcgttttcgaacacttcgtggcatgaaa
aaccgctttggtgcaatcaatgaattgggcgttttcgccatgctcgaaaatggcttaaaa
gaagtcaaaaatcctagctctatattcttgaatcgcagcaatcatcctgcggctggcagc
cttgtcatggtggtttgggaaggaacgcgtcctctattggttgagcttcaagctttggtc
gatgattcagcattaggcaacccaagacgcgttaccgtaggctttgatcataatcgccta
gcaatgttattagcggtactccataagcatggcggcttactcacatccgatcaagatgtc
tatttaaacgtagtaggcggtgtcaaagtattggaaacaagcgcggatctagcggccatc
gcggcggtggtttctagctttcgcgacagagtcttgcctcatgacttggtggtacttgga
gaggtgggtttatctggtgaaattcgccctgtgccatcagggcaagaacgtattagtgaa
gcggcgaaacatggctttaccagagccgtggtaccaaaagccaattgcccgaaaaagccc
attgaaggcatgaaggtgattggagtggatcgtttatcagaagcattagacgcgattttc
gaagactaa
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