Marinomonas rhizomae: KDW99_04760
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Entry
KDW99_04760 CDS
T08610
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi00300
Lysine biosynthesis
mrhi00470
D-Amino acid metabolism
mrhi01100
Metabolic pathways
mrhi01110
Biosynthesis of secondary metabolites
mrhi01120
Microbial metabolism in diverse environments
mrhi01230
Biosynthesis of amino acids
Module
mrhi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KDW99_04760 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KDW99_04760 (dapF)
Enzymes [BR:
mrhi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KDW99_04760 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UTW00448
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All DBs
Position
1030878..1031708
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AA seq
276 aa
AA seq
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MLLKFTKMHGLGNDFVVVDAVSRKVFFNKQQIERLSNRNWGIGFDQLLVVEPPTNPDMDF
RYRIYNSDGSEVEHCGNGARCFAKFVLDRELTNKRIINVETKRGAIQLRVLDGGLVTVDM
GAPSFDPVDLPFTAEPQDGLYSIMAGETEYLMTPVSVGNPHAVIKVDQLMDEEVAKAGAL
LECHERFPRNVNVGFMQVISSDEINLRVYERGVGETQACGTGACAAVVAGIKQGWLSPKV
TAHLRGGDLHIEWQGEGQPILMTGPAEKVFEGQIYL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgttgttgaaatttaccaaaatgcatgggctaggaaatgattttgtcgtcgttgatgcg
gtgtctcgtaaagtgttttttaataaacagcaaatcgagcgattaagtaatcgaaactgg
gggattggttttgatcagcttttagtggtcgagccgccaacgaatcctgatatggatttt
cgttaccgcatttataattcagatggtagcgaagttgagcactgtggaaatggtgctcgt
tgctttgctaagtttgttttagatcgagaattaacgaataagcgtattattaatgttgaa
acaaagcgcggtgccattcaactgcgtgtattagatggtggtttggtcaccgtcgatatg
ggcgcgccaagctttgatccagtagacctaccttttactgcagaacctcaggatggtctt
tacagcattatggctggtgagactgagtatttaatgacaccagtgtctgtgggaaatcct
catgccgtgatcaaagtcgatcagttgatggacgaagaggttgctaaagcaggagccttg
cttgaatgtcatgaacgtttccctcgaaatgtgaatgttggttttatgcaggttattagt
tctgatgaaatcaatttgcgtgtttatgaacgtggcgtcggggaaactcaggcctgtgga
actggagcttgtgcggccgtcgttgccggtattaagcagggatggttgtctcctaaagtg
accgctcatttacgcggaggtgatctacatattgagtggcaaggtgaaggtcagcctatt
cttatgacgggccctgctgaaaaggtgttcgaaggtcaaatttacctatag
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