Marinomonas rhizomae: KDW99_05530
Help
Entry
KDW99_05530 CDS
T08610
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03030
DNA replication
mrhi03430
Mismatch repair
mrhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KDW99_05530 (dnaE)
03430 Mismatch repair
KDW99_05530 (dnaE)
03440 Homologous recombination
KDW99_05530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrhi03032
]
KDW99_05530 (dnaE)
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_05530 (dnaE)
Enzymes [BR:
mrhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KDW99_05530 (dnaE)
DNA replication proteins [BR:
mrhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KDW99_05530 (dnaE)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KDW99_05530 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
DUF655
NDUFC2_fungi
Motif
Other DBs
NCBI-ProteinID:
UTW00594
LinkDB
All DBs
Position
1191777..1195253
Genome browser
AA seq
1158 aa
AA seq
DB search
MSTSFIHLRVHTEFSLVDGLVKIKGLLGTTEFMSMPAVAITDENNLCGFVRFYKGAMEKG
IKPICGADVVVDEDEDVDSRYRFTLLATSNKGYKNIIAIISKGYQLGQVEGRPIVQREWI
EAHSEDVIALSGAGFGDIGYLLQKGRNEQAKNRLAHWMSVFPNRFYVELQRTSRPGEESY
IHAVVPLASELGCPVVATNDVRFLKRENFDAHEARVCIHDGVTIDDPRRKRRYSEEQYFK
TPEEMAELFQDIPEALENTVEIAKRCSVDVLLGKYFLPDYPVPEGMTMEEFFSKLSYDGL
IERFNFLTKKYGERIEKRRQEYWDRLDFELTIINQMGFPGYFLIVMDFIQWAKDNDIPVG
PGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDNRDRVIDYVS
RTYGRDAVSQIITFGAMAAKAVVRDVARVQGKPYSLGDKLSKLIPFEIGMTLKKALEEEP
ALPEFLAGDEDAAEVMEMAISLEGVVRNFGKHAGGVVIAPTKLIDFAPLYCEEDGSGLVT
QYDKNDVEEAGLVKFDFLGLKTLTVVDWAVKNIDTINALEGKPPLDISLIDLEDKSTYDL
LKRAETTAVFQLESRGMKELIKKLLPSRFEDIIALVALYRPGPLGSGMVDDFINRKHGRA
ELAFPHPDYQHQDLIPVLEPTYGIILYQEQVMQIAQVLAKFSLGGADLLRRAMGKKKAEV
MAEQRLIFMEGALKNNVDKDLSGNIFDLMEKFAGYGFNKSHSAAYALVSYQTAWLKNHYP
APFMAAVLSADMQNTDKIVIFIEECRSMSLALELPNVNESVYKFTVNPKGAIVYGLGAIK
GVGEGPIEAIVEARKEGPFEHIFDFCQRVGKRVNKRVMEALVRSGAFDTIGPNRATLFAC
IDEALKRAVQDAKNQDAGMMDLFGVAVEESTEDAYRDIGIQHEWPPRQRLDGEKDTLGLY
VTGHPIDEYEKEIRRFVRSKIVDLQPKRGDTQIMAGLIVDLRITKSKKGGNIAFVTLDDR
SARIEVTVFPDNYDTFRDVIVKDEVVVVEGEITVDEFRGGQKVIARNILDIAQARVRYVE
ALRITWTSETVTPTEIQTLANFMESYRGDGCDVVIGFDTPQACGDIRLGSSWKVRPDDEL
IHQLQKQYGKQNVQLVYT
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttgtccacgtcatttatacatctacgagtccataccgagttttccttggtggatggcttg
gtaaaaatcaaaggcttgcttggtactactgagtttatgtctatgcctgccgttgccatt
acggacgaaaataacctttgtggttttgtgcgtttttacaaaggcgcaatggaaaaaggt
ataaagccaatttgtggtgccgacgtcgtggttgacgaagatgaggatgtggattctcgc
tatcgatttaccctattggcgacgtcaaataaaggctacaagaatatcatagccattatt
tcgaaaggctatcagttagggcaggtagaaggtcgtcctattgttcagcgtgaatggata
gaagcacatagcgaggatgttattgcgctctctggtgctggttttggtgatattggctat
ttattgcaaaaggggcgaaatgagcaagccaaaaatcggttagcgcattggatgtctgtg
tttcctaatcgcttttatgttgagttacaaagaacgagtcgtcccggagaagaaagttat
atacacgcagttgtgccattggcgagcgagctgggttgtcctgtcgttgcgactaatgat
gtgcgttttttgaagcgtgaaaactttgatgctcatgaagcacgagtttgtattcatgat
ggcgttactatcgatgaccctcgccgtaaacgtcgttattcggaagaacagtactttaaa
acgcccgaagaaatggcggagctgtttcaagatatcccagaagctttagaaaataccgtc
gaaattgccaagcgatgtagtgttgatgttctgttgggtaagtactttttaccagactac
cctgtgccagaaggcatgacgatggaggagttctttagcaagctttcttatgacggcctg
attgagcgctttaacttccttactaaaaaatatggcgaacgtattgaaaaacgccgtcag
gaatattgggatcgtttggatttcgaattaactattattaaccaaatggggttccctggt
tacttcttgatagtaatggactttatccagtgggccaaagacaacgatatcccagtaggc
cctgggcgaggttctggtgcgggttccttggtggcctatgcgcttaaaatcaccgatctt
gatccacttgaatatgacttgttatttgagcgattcctaaaccctgagcgggtatccatg
cctgactttgacatcgatttctgtatggataaccgtgaccgagtgatcgattatgtgtca
cgaacttatggtcgtgacgctgtgtctcagattatcacctttggagcaatggcagcaaaa
gccgtggttcgagatgtcgcaagggtgcaaggtaaaccatatagcttgggtgataagcta
tctaaactgatcccatttgaaatcggcatgacacttaaaaaggccttagaagaagagcct
gcattacctgaatttttagcgggggatgaagatgcggccgaagtaatggaaatggcaatt
tctttagaaggcgtggtacgtaactttggtaagcatgctggtggtgtggtaattgcacca
accaaattgatcgattttgccccgctctattgtgaagaagatggttctggtctggtgacc
caatacgacaaaaacgatgttgaagaagcgggcttggtaaagttcgatttcttgggtctt
aaaaccttaaccgttgtcgattgggccgttaaaaacattgataccattaatgcgctagaa
ggtaagcctccgctcgatatctctttgatcgatctggaagacaagtccacttatgaccta
ctaaaacgagctgaaactaccgctgtattccagctggaatctcgcggtatgaaagagttg
attaaaaagcttttgccatcgcgctttgaagatattatcgccttggtggccttgtatcgt
cctggtccattgggttccggcatggttgatgactttatcaaccgtaagcatggtcgcgca
gaattggcttttccgcaccctgattaccagcatcaagatttgattcctgtattggaacca
acttacggcattatcttgtatcaagagcaggtaatgcagattgctcaggtacttgccaaa
ttctcactgggcggcgctgatttgcttcgtcgtgccatgggtaagaaaaaagccgaagtt
atggctgagcagcgtttgatctttatggaaggcgctcttaaaaataatgttgataaagac
ttgtcaggtaacatctttgacctgatggaaaagttcgcagggtatggttttaacaaatcg
cactcagcggcctatgcactggtttcttatcaaacggcttggttaaaaaatcattaccct
gcgccatttatggcggcggtattgtctgcagatatgcagaacacagataagatcgttatc
ttcatcgaagaatgtcgttctatgtcgctggcattagagttaccgaacgtgaatgagtcg
gtttataagtttaccgttaatccaaaaggtgccattgtatatggtctcggcgccattaaa
ggtgtgggtgaaggtccgattgaggcgattgtagaagcacgtaaagaaggaccatttgag
catatttttgatttctgccaacgtgttggtaagagagtgaataagcgagttatggaagcc
ttggttcgttcaggtgcgtttgacaccattgggccaaatcgtgcaaccttgtttgcctgt
attgatgaggctcttaagagagcggttcaagatgcgaaaaaccaagatgccggcatgatg
gatctgtttggggttgcggtagaagaaagtacggaggatgcatatagggatattggcatt
cagcatgaatggcctccgcgccagcgccttgatggtgagaaagatacactgggtttgtat
gtgacaggtcacccaattgatgaatatgagaaagagatacgtcgctttgtacgttcaaaa
attgtggatttacagcccaagcgtggtgatacgcagatcatggcgggcttgatcgttgac
ttgcgtattactaagagtaaaaaaggtggtaacattgcctttgtcactttagatgaccgt
tcagctcgaatagaagtgacggtgtttcctgataactatgacacttttagagacgttatt
gtcaaagatgaagtggttgtggttgaaggggagattactgttgacgagtttcgtggcgga
cagaaagttattgcaagaaacattctagatattgctcaggctcgagttcgttatgtggaa
gcattacgaattacatggacgtcagagacagtaacaccaacagaaatacagacattggca
aactttatggaatcatatcgaggcgatggctgcgatgtggtgataggttttgatacaccg
caagcatgtggtgacatccgtttaggatcgagttggaaagttcgtccggatgacgaatta
attcatcaacttcagaaacaatacggtaaacaaaatgttcagttagtgtatacttag
DBGET
integrated database retrieval system
