Marinomonas rhizomae: KDW99_07095
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Entry
KDW99_07095 CDS
T08610
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi00550
Peptidoglycan biosynthesis
mrhi01100
Metabolic pathways
mrhi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KDW99_07095 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KDW99_07095 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mrhi01011
]
KDW99_07095 (mrdA)
Enzymes [BR:
mrhi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KDW99_07095 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mrhi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KDW99_07095 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
ULD_2
Motif
Other DBs
NCBI-ProteinID:
UTW00883
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All DBs
Position
1533047..1534927
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AA seq
626 aa
AA seq
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MSRRHQNFRNYRQEQRLTQQRVFAAAIFVLLMAIVLMARLFYLQVIEHELYQTKANDNRV
MLVTEPPPRGLIYDRNGLVLADNRPIHSLTVIPERVESFPKLKQMLSGIIDISDDEWEDF
DERRKEYRRPYQSLTLKSQLTDEEWAKVSVDLYKLDGVQVEAQLTRYYPYGEAFAHAIGY
VGRITSKDLETVDKLAYQGALFIGKTGVEGYYEKTLFGEAGLSKVEVNARGRIMSELERQ
NPTPGKDLHLYLDARLQQYAYDLLGDYTGAVVAIDPTTGGILALVSKPGYDPNLFVRGIS
IDDYAKLRQSKKLPLFNRALRGGYPPASTIKPFMGLAGLEYGFSSWTERYFAKGYYQINP
DGRRYRDWKRTGHGWINLERSIIESVDTYYYQLANKMGITPIHNFLTRFGFGQTTLLDLN
GESHGLLPSNEWKKAKYKEPWYPGDSVNVGIGQGFMVATPLQIASATSALASKGHYFYPR
MTQLVGDKIIEFPDGLGDEHDIVLKDQRNWGRMIDAMRKVITDSHGTARRLQGTDYEIAG
KTGTGQVFSLQEDQEYDADSLEKRLHDHALFIGFAPAGNPKISVFAIFENGGSSSKPADL
TKALFDAYLHDDYPARYDYLKGDKND
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgtcgacatcaaaacttccgcaattatcgtcaagaacagcgactgacacagcag
cgtgtttttgctgccgctatttttgttttgctgatggctattgtgttgatggctcgactg
ttttatttgcaggttattgagcatgagttatatcaaaccaaggcaaatgataaccgtgtt
atgctggttacagaaccgccgcctagaggtttgatatacgatcgtaacggattggtgttg
gctgataatcgtcctattcacagtttaactgtgatacctgaacgggtagaaagttttccg
aagttaaagcaaatgctttccggcattatcgatattagtgatgatgagtgggaagatttt
gatgaaagacgaaaagagtatcgccgcccttatcaatcccttactttaaaatctcaattg
accgatgaagagtgggccaaggtctctgtcgatttgtataaactcgacggtgttcaggta
gaagcgcaattaacgcgctattacccttatggtgaggcatttgctcatgccattggttat
gttggccggattacctcaaaagacttagaaacagtcgataagttggcttatcaaggcgct
ttatttatcggtaagacaggtgtagaaggctattacgaaaaaaccttatttggagaagct
ggtcttagcaaggttgaggtgaatgctcgtggacgcattatgtcggaacttgagcgacaa
aatccaacgccgggtaaagatctccacttatatttagacgccagactacagcaatatgcc
tacgatcttttgggtgattatactggcgcggttgtcgcaattgatcccacaacaggtggg
attctcgccctggtttctaagcctggttatgatcctaacctgtttgtgcgcgggatttct
attgatgattatgccaaattacgccaatccaaaaaactccctctttttaaccgtgctttg
cgtggaggttatcctccagcgtcaacgattaagccttttatggggcttgctggtttagag
tatgggttttcgtcatggactgaacggtattttgcgaaaggctattatcaaataaatcca
gacgggcgtcgctaccgagactggaaacggacagggcatggttggattaatttagagcgt
tctattattgagtctgttgatacctattattatcaactggctaataaaatgggaattact
cctatccataattttttgacgcgttttgggtttggtcagacaaccttgctcgatttgaat
ggtgagagtcatggcttgttgccttctaatgaatggaaaaaagccaaatacaaggagcca
tggtaccctggcgattcagtcaatgtaggtatcgggcagggctttatggtggcgacacct
ctgcaaatagcttcggctacctctgctttagccagtaaagggcattatttttaccctcgt
atgacgcaacttgtgggagacaaaatcattgaatttccagatggtcttggggatgagcac
gatattgttttgaaggatcagcgtaattggggacgtatgattgatgctatgcgtaaagta
ataaccgactcgcatggtaccgcaaggcgtttgcaaggaacggattatgaaatcgcaggg
aaaacagggaccgggcaagtatttagtctgcaagaagaccaagaatacgatgcagattcc
cttgaaaaacgtttgcatgaccatgcgttatttataggctttgcacctgctggaaatccg
aagatttcagtgtttgccatttttgaaaacggtggtagtagttcgaaacccgcggattta
acgaaagcattatttgacgcttatttgcatgatgattatccggcgcgttatgactatttg
aaaggtgataaaaatgactga
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