Marinomonas rhizomae: KDW99_08620
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Entry
KDW99_08620 CDS
T08610
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03420
Nucleotide excision repair
mrhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDW99_08620
03430 Mismatch repair
KDW99_08620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_08620
Enzymes [BR:
mrhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDW99_08620
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDW99_08620
MMR (mismatch excision repair)
Other MMR factors
KDW99_08620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UTW01575
LinkDB
All DBs
Position
1860555..1862834
Genome browser
AA seq
759 aa
AA seq
DB search
MTSSLTDEQQSVVHHDLSLPAKVIAVAGAGKTTTLISRIEHLLGQGVDPSHIGVFMFNKS
AQEEFSERLSKRLMTAGHLRSPSVMTFHAFGMKFCRRLEQQGWLAPAKLVTDDFSLVKML
REALQRLVRSGEKIAILAEKDWLEDVLLFVDQVKASDQAAQIVFEALGWSKERKFFPALY
DELEKLRKRNNIRFFADLLSDPYDLISQLDEAERVRVRGLVPDFRYLLIDEFQDINPCQY
ELLKLLYPAPCQWMIVGDVQQCIYEWRGASPDIMATQFDQDFANVAAYPLSTSFRFGHAV
GLMASSVISENDPDALVIGAGERTRVSFARAPKTGKALLGELKSWVDEGRALSDTAVLVR
LYSDMVPVQLALMHKGVPYQLHGDSPLLENRQIRMLMAYLAVIAGGLETSNTFFHPDDIE
YLLTVPSLGGSMAQRKTLIQQAKQSPHLLPQIIESVADATEGWRAKKLYERADWLRSLDI
YRTDPGQGLAHTLEKLGIYRYFESTSSKDIQTQEKIATCDAFMAYVRGVGGDAKSILEQL
ATLNEKQTDDSHGVHLMTIHKSKGLEFDQVLLSGLQEGRFPYYDEDLSVIDKQAASDLAS
ERRLFYVAITRAKQKLVLLESPSADDHKRMKQGDIPRAALKSLSLSRFVFEAQPYAVSRI
CEAWYVENVGTPIDTEKGSIFQRYLNAVDPSPSLTFRHRVEGKSLLQPGDKVRHDQFGQG
VVVRQERDDKQMIFVDFGEVGLKRFNPKHTQLIKVSSRA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcctcgttaaccgatgagcagcaaagcgttgttcatcacgatctttcgttgcca
gcaaaagtaatcgccgtagcgggcgcaggcaaaaccaccaccttaatttctcgtatagag
catttattaggtcagggcgtggacccgtctcatatcggcgtgtttatgtttaacaaaagc
gcccaggaagaattctccgagcgtttaagtaagcgactcatgacggccggacatttgcgt
tcccccagtgtgatgacttttcatgcctttggtatgaagttctgtcgacgtttggagcag
caaggttggttggctcctgcgaagctggttaccgacgattttagcttggtgaagatgttg
cgcgaggccttgcagcgcctggttcgaagtggtgagaaaattgcgattttggccgagaaa
gattggctggaagacgtgttgttatttgtcgatcaagtcaaagcctctgatcaagctgcg
cagattgtttttgaagccttgggttggtcgaaagagcgtaagttttttcctgccctttat
gacgaattggagaagctacgcaaacgcaataacattcgtttctttgccgatttacttagc
gacccttacgatttaatcagtcaattagacgaagctgaacgtgtgagagtgcgtggcttg
gtgccagatttccgctacttgttaattgacgagtttcaagacatcaacccttgccaatac
gagctactaaaattgctttatcctgcgccttgtcaatggatgattgttggcgatgtgcag
caatgtatttatgaatggcgcggcgccagtccagacattatggcgacgcaatttgaccaa
gattttgccaatgtagcagcttatccattgagtaccagtttccgctttggccatgccgtc
gggttaatggcgtcgagcgtgatcagtgaaaacgatcctgatgccttggtgattggcgct
ggcgaacgtacgcgagtgtcttttgctcgcgctccgaagacaggtaaagctctgttgggc
gagctaaaatcttgggttgatgaaggtcgtgcattaagcgacaccgcggtgttggtgcgc
ttgtacagcgacatggttccagtgcaattagccttgatgcacaaaggcgtgccgtatcaa
ttgcatggtgattcgccattgttggaaaatcgccaaattcgcatgctaatggcgtatctc
gcggtgattgctggtggtttggaaacgtcgaacaccttctttcatcctgacgatattgaa
tacttgctgacggtgccgagccttggtggttctatggcgcagcgcaaaaccttgatccaa
caagcaaaacagtcaccgcatttgttgccacagattatcgagtctgtggccgacgctacg
gagggctggcgcgcgaaaaaactctacgagcgtgctgattggttgcgcagccttgacatt
tatcgcaccgatccagggcaaggcttggcgcatactttggaaaagttgggtatttatcgc
tacttcgaaagtaccagtagtaaagatattcagacccaggaaaagatagccacttgcgat
gcgtttatggcgtatgtgcgtggagtgggcggtgatgcaaaatcgattttagaacaactt
gcgactttgaatgaaaaacaaaccgacgatagtcacggcgtgcatctgatgacgatccat
aaatcgaaaggtttggagttcgaccaagtattgttgtctggcttacaagaagggcgcttc
ccgtattatgacgaggatttgagcgtcattgataagcaagcggccagtgatttggcgtct
gaacgtcgtttgttttatgtggcgatcacccgtgccaaacagaagctagtattgcttgaa
tccccaagtgccgacgatcataaacgcatgaagcagggcgatatccctcgcgccgcattg
aagagtttgtccttgtcacgttttgtgtttgaagcgcagccttatgcggtgagtcgtatt
tgcgaagcttggtatgttgaaaatgttggcacgccaattgatacggaaaaaggttcgatt
tttcagcgttacttgaacgcggttgatccttctccgtcgctgacctttcgtcatcgagtg
gaagggaaaagtctgctgcaacctggcgataaagttcgtcatgaccagttcggacagggt
gttgttgtacgacaagaacgcgacgacaaacaaatgatttttgtggattttggcgaagtg
ggtctaaagcgttttaatcccaagcatacacaacttattaaagtatcttccagagcttaa
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