Marinomonas rhizomae: KDW99_10500
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Entry
KDW99_10500 CDS
T08610
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi00260
Glycine, serine and threonine metabolism
mrhi00630
Glyoxylate and dicarboxylate metabolism
mrhi00670
One carbon pool by folate
mrhi00785
Lipoic acid metabolism
mrhi01100
Metabolic pathways
mrhi01110
Biosynthesis of secondary metabolites
mrhi01200
Carbon metabolism
Module
mrhi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KDW99_10500 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KDW99_10500 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KDW99_10500 (gcvP)
00670 One carbon pool by folate
KDW99_10500 (gcvP)
Enzymes [BR:
mrhi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
KDW99_10500 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
UTV97740
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Position
2210420..2213284
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AA seq
954 aa
AA seq
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MTSCIRDLLNSDEFIARHIGPDASEQAKMLSTIGINSLPELIEKTVPEAIRQANLDLSAN
PVSENEALVQLKAIANQNKVARSFIGMGYHDTHVPSPILRNLLENPGWYTAYTPYQPEIS
QGRLEALLNFQQVIIDLTGMEISNASLLDEATAAAEAMTLMKRSNRKKSDKLFVASHCLP
QTIDVVKTRAELLEIEVIVDDIANFAQHDVFGAIIQYPGIDGTVTDLTPVIAQAHEQGAL
VSIAVDLLSLVLLKSPGDMGADIVFGSAQRFGVPMGFGGPHAAFLATKDAFKRSMPGRVI
GVSKDSHGKPALRMAMQTREQHIRREKATSNICTAQALLAMMAGFYAVYHGPAGLKKIAN
RVAALTNCFANAIQVKGFTTNSSYFDTVIVNTGEQTDSIMAKGAEKLMNFHKASDSQVSI
ALNETITPNDLIDLAECFGAELSLEDITNTESAYGFDDALLRQDDILTHPVFNSHHSETE
LMRYMHQLEVKDIALNQSMIPLGSCTMKLNAASEMIPVTWAEFGRIHPFAPSTQVAGYHA
LLQELIDMLSKATGYDTVSLQPNSGAQGEYAGLIAIDKYHKSRGDHDRDVCLIPSSAHGT
NPASAALAGMKVVIVKCDEDGNIDLVDLAEKAEKHAAELSCIMATYPSTHGVFEEHIREV
CGIVHKFGGQVYIDGANLNALVGVAPPGSFGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
SHLAPFLPGHAVSPVMGMLEQHGAVSAAPYGSASILVITWMYIKMMGDKGLRDATFNAIL
NANYIAKRLGEHYPVLYTGKNGTVAHECIIDIRPLKAESGISEEDIAKRLMDFGFHAPTM
SFPVAGTLMIEPTESENLEELDRFCDSMIQIRKEISKVQAGEWPLEDNPLVNAPHTADSL
LDMEWNHAYSRKEGAYPLNWIKARKYWPPVGRIDNVYGDRNLFCECPPIESYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtgcattcgcgatttgttaaacagtgatgaatttattgctcgccacattggc
cctgacgcttcagagcaggcaaaaatgctatctacaattggcatcaacagccttccagaa
ctaatcgaaaaaacagtcccggaagccattcgtcaagcaaatctagacctttcagctaac
cctgttagtgaaaacgaagcacttgttcaactaaaggccatcgccaatcaaaacaaagta
gcgcgttcttttatcggcatgggttaccacgacacacatgtgccctcaccaattctgcgc
aacctactagaaaacccaggctggtatacggcttacacgccttaccaaccagaaatatct
caaggtcgcttggaagcactattaaacttccaacaagtcattatcgacctaacaggcatg
gaaatttccaacgcctctttattagatgaagcgacggccgcagccgaagcgatgacactc
atgaaacgctccaaccgcaagaagagcgataaattattcgttgcaagccactgcttgcca
caaacaatagacgtcgttaaaactcgagcagaactgcttgaaattgaagtcatcgttgat
gatatcgcaaatttcgcacaacacgatgtattcggcgccattattcaatacccaggcatt
gatggcacagtgactgatttaacccctgttattgcccaagcacatgagcaaggcgcactt
gtcagcattgccgtcgacctactgtctcttgttctattgaaatcaccaggtgatatgggt
gctgatatcgttttcggctccgctcagcgctttggtgtaccaatgggctttggtggccca
cacgctgcattcctagcaaccaaagatgcattcaaacgctctatgccaggtcgtgttatc
ggcgtatcgaaagacagtcatggcaaaccagcgctacgcatggcaatgcaaacacgcgag
caacatattcgccgtgaaaaagcgacatcgaacatctgtaccgctcaagcactactagcg
atgatggctggcttctacgcggtttatcacggccctgctggccttaaaaagatagcgaac
cgcgttgcggcgcttaccaactgttttgccaacgccatccaagtaaaaggcttcaccact
aactcaagttactttgataccgttatcgttaacactggtgaacaaactgatagcatcatg
gctaaaggcgctgagaagttaatgaacttccacaaagcgtctgacagccaagtgtctatc
gcgttaaacgagacaatcaccccgaatgatcttatcgacttggctgaatgcttcggcgca
gagctatcactagaagacattacaaacacggaaagcgcttatggctttgatgatgcccta
ttgcgtcaagatgacatactgactcacccagtatttaatagtcatcacagcgaaaccgaa
ttgatgcgctatatgcaccaactggaagtcaaagacattgcgcttaaccaaagcatgatc
cctcttggatcttgcacaatgaaactaaatgcggcatccgaaatgattccggttacttgg
gctgaatttggtcgcattcatccgtttgcaccaagcactcaagttgctggctatcatgca
ttattgcaagagctgatcgacatgctttccaaagcaacgggatatgacaccgtttctttg
caaccaaactctggcgcacaaggtgagtacgcaggccttatcgctatcgataagtaccac
aaatctcgcggcgaccatgatcgtgatgtctgtttgattccaagctcagctcatggaaca
aacccagcttctgctgcgttagccggcatgaaagttgtcatcgtgaaatgcgacgaagac
ggcaacattgatttagttgaccttgctgaaaaagctgaaaagcatgctgctgaactgagt
tgcatcatggcaacatacccatctactcacggtgtatttgaagaacacattcgtgaagtc
tgtggcattgttcacaaatttggtggccaagtgtacattgatggtgccaacctaaacgct
ctagtgggtgttgcgcctcctggctcatttggtggtgacgtttcgcatcttaacctacat
aaaacattctgcatcccacatggtggtggcggtccaggcatgggcccaatcggtgttaaa
tctcaccttgcgcctttcttacctggccacgcggtttcccctgtgatgggcatgcttgag
caacacggcgcggtttcagccgcaccatacggtagtgcaagtattcttgtgatcacttgg
atgtacatcaaaatgatgggtgacaaaggcttgcgtgatgcaaccttcaacgcaattttg
aatgcaaactacattgctaagcgcttaggcgaacactatccagtactttacactggcaaa
aatggcacagttgcacatgaatgcattatcgatattcgcccattgaaagcggaatcaggt
attagcgaagaagacatcgctaaacgtttgatggattttggcttccacgcacccactatg
tccttccctgttgctggcacattgatgatcgaaccaacagaatcagaaaacctagaagag
ctagaccgcttctgtgattccatgattcaaattcgcaaagaaattagcaaggtgcaagcc
ggtgaatggcctctagaagacaacccgctagtcaatgcgccacacacagcagacagcctt
ttagatatggaatggaatcacgcttattcacgtaaagaaggcgcctacccattaaactgg
atcaaagctcgtaaatactggcctcctgttggccgtatcgacaacgtctacggcgatcgc
aacctattttgcgaatgcccaccaatagagagctacgaagactaa
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