Marinomonas rhizomae: KDW99_10815
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Entry
KDW99_10815 CDS
T08610
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_10815
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDW99_10815
Archaeal homologous recombinant proteins
KDW99_10815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
DUF4407
AAA_22
RsgA_GTPase
TRPM_tetra
MMR_HSR1
GTP_EFTU
DUF3005
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
UTV97795
LinkDB
All DBs
Position
complement(2285584..2289312)
Genome browser
AA seq
1242 aa
AA seq
DB search
MKICKLRLKNLNSLKGEWEIDFTKEPFDDAGVFAIVGPTGAGKSTLLDAICLALYHETPR
LKVSPSQNDVMTRHTSECLAEVEFEIKGKGYRAFWGQRRARGQSDGKLQPMTCELCERDG
TIITTKINEKIDKIADITGLDFSRFTKSMLLAQGGFSAFLNASANDRAELLEELTGTEIY
GDVSKWVFDKHKLEKQAIASLEKFNEQTQLLSDDAFSELKLTESSFESNEKANADALKQH
QAILEWRRTEKKLQEQVAQYQQQFDDATQALADFAPQQRQLEQALTAQVLQPDYDKQQGL
QSRLDQNQADVSQYSEMHQAQLKQSQILTDSVEQAKEKLARARADLETLNNKINDEIQPI
LSRQESVKAQHQDSLARLKQATEKVDNQQAQLKDVSEKQAGIDKACDESKAILSRWTSPE
KIENQLASWQHQAQIIETNTHAIAELEISIDQDTKNYDAARSAHGSNQAKLEHEQASIEE
RQQALQSTVHDYMALSSQREYADWQKGYHQTERAQYNAQSLWKQFHQYQDQQLQLSELDE
NLNTMASRIQQQQSQLEQQRQTYKNKLRHQKSIEKLAEAERHIVALTHLRNELGEHDDCP
LCGSAEHNLANALYQADSGSQEEFLLLGKELDGLKGQGMQLAADLESMQRELTSAQTRRQ
QLIDGLLATENDLKEWLTSLNQDQGFNLSDKEQVSALVQHVEQDWLALQNIAPKLEALHQ
SRLALETELQNLVVQHQTTQQQVSQDQNQCQLLWQTLETHQKNLVSKKDEQEKITANLRH
DMQQSGVPDSYFDLSLVDALTQLQEAMKQWRDSKAGYDALLQQREQFSYESKNLENTLKE
SQQLRDDAQAKVYELDAGLADITKQLYNLLGDKSVGELRQEAQSLADRAHQELEKVEAER
QQLAQALASSKASLDALNKTRLVLAEEYDAALAHWQQSLTEKGFEGEAAWLQASLSAEEM
AQHQATLKHLQEAVSKLQTLFNQSQESLAKHIERKSELVALEGKESGSAEFDAISLDALE
EKYTQLDTERQALHRQWGVISQQIQEETQRREQVAKSKEALEARRGAFIHLERLNHLIGS
ADGAKFRRFAQSLTLDHLVYLANQHLDILHRRYQLMRNEDALSLLVVDTWQANASRDTKT
LSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGTLDSETLESALDALDNLHSSGKT
IGIISHISALKERIPVQIKLTKQSGLGVSRLSSEFAVHSPEE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgcaaactgcgcctgaagaatttgaactccctaaaaggcgaatgggaaatt
gattttaccaaagagccatttgacgacgctggtgtgtttgccattgtcgggccgacggga
gcgggtaagtcgaccttgttggatgcgatttgtttggctttgtatcacgaaacgccgcgc
ctgaaagtgtcaccaagtcagaacgatgtgatgacgcgtcatacgtcggaatgtttggcg
gaagtcgagtttgaaataaaaggcaaaggctatcgcgctttctgggggcagcgacgcgct
cgaggtcagagcgatggtaagttgcaaccgatgacttgcgaactttgtgagcgtgacggc
accatcattaccactaagataaatgaaaaaatcgataagatagccgacatcactggtttg
gatttttcgcgttttaccaagtctatgttgctggctcaaggtggcttttcggcgtttttg
aatgcgtcagccaatgacagggcagagttattagaagagctaaccggcacagaaatttac
ggtgacgtgtcgaagtgggtgtttgataaacacaagcttgagaagcaagccatagcgtcg
ctcgagaagtttaatgagcagactcagttattatcagatgacgctttttctgagctaaag
ctgaccgagtcgagttttgagtctaatgaaaaagccaatgccgacgcgttaaagcaacat
caagcgatattggagtggcgacgtactgagaagaaactgcaagagcaagtggctcaatat
cagcaacaattcgatgatgcgacgcaagcgctagcggattttgcacctcagcaacgacag
cttgaacaagctctcacagcacaggttttacagccagattatgacaaacagcaaggttta
caatcacgtttggatcagaatcaggcggatgttagtcaatactctgaaatgcatcaagca
cagcttaagcaaagccagatattgactgattccgttgagcaagcgaaagaaaagttagcc
cgtgcgcgagctgatttggaaaccttgaataacaaaatcaatgatgaaattcagcctatc
ttgtcccgccaagaaagtgtgaaggctcagcatcaggatagccttgctcgacttaagcaa
gcgacagaaaaagtcgataatcagcaggcgcaactaaaagacgtgtctgaaaaacaggcg
ggtattgataaagcctgtgacgaaagcaaagccattttaagccgctggacatcgccagaa
aaaattgaaaatcagttggctagttggcagcatcaggcgcaaatcatagaaacgaatact
cacgctattgccgaacttgagatcagtatcgatcaagataccaaaaattatgatgctgct
cgctctgctcatggaagcaatcaagctaagttagagcatgaacaagccagcatagaagag
cgtcagcaagcattgcagagcacggttcatgattacatggcgttatcatcgcagcgtgaa
tatgccgattggcagaaaggttatcatcaaactgaacgtgctcagtataatgcgcaatca
ctctggaaacagtttcatcaatatcaagatcaacagttgcaattgtccgagctggacgag
aatctgaatacaatggcaagccgtattcagcaacagcaaagccagctagagcaacaaagg
caaacctacaaaaacaagcttcgtcatcaaaaatcgattgaaaaacttgccgaggcggag
cgtcatattgtggcgttaacccatttacgtaatgagttaggtgaacatgatgattgtccg
ttgtgtggttcagcagagcacaatcttgctaatgctttgtaccaagcagattctggtagc
caagaagagtttcttctattaggcaaagaattagacggtctgaaaggccagggtatgcag
ttggcggcagacttggaatccatgcagcgcgaattaacatctgctcaaacgcgacgtcag
caattgatcgatggcttactggcaaccgaaaatgatctgaaagaatggctgacgtcgttg
aatcaggatcaaggttttaacctgtctgataaagaacaagtctctgctctggttcaacat
gtagagcaagattggctggcgctgcaaaacatagcacctaaacttgaagccttgcaccag
tctcgtttggctttagagactgagttgcagaacctagttgttcagcaccaaacaacacag
cagcaggtttcgcaagatcagaatcaatgtcaattattgtggcaaaccttagagactcat
caaaaaaatcttgttagtaagaaggatgagcaagaaaaaatcactgcgaatttacgccat
gatatgcagcaatcgggtgtgccagacagctattttgatttgtctttggttgatgcgttg
acccagttacaagaggccatgaagcaatggcgcgacagcaaagccggttacgatgctttg
ttgcagcagcgtgagcagtttagttatgaaagtaaaaatttagaaaatacgctaaaagag
agtcagcaactacgcgacgatgcgcaagccaaagtgtatgagttagatgcgggcttagct
gacattactaaacagctgtataacttgctaggtgataagagtgttggtgagcttcgtcaa
gaagcgcaatctttagctgatcgcgctcatcaagagctggaaaaagttgaagcggagcgg
cagcagcttgctcaagctttggcgtccagcaaggcgtcgctagatgcacttaataagacg
cgtctagttttggcagaagaatatgatgctgcgcttgctcattggcaacaatcactgaca
gagaaaggctttgagggtgaagctgcttggctgcaagcaagcttatccgcagaagaaatg
gctcagcaccaagcaacacttaagcatcttcaagaggctgtttctaagctacaaacatta
tttaatcaatctcaagaatctttagctaagcatattgaaagaaagtctgaacttgtcgct
cttgaagggaaagaatcaggtagtgcggagtttgacgccatttctcttgatgcactagaa
gaaaaatacactcagctcgatacagagcgccaagcgttgcatcgccagtggggcgttatt
agtcaacagattcaagaagaaacacagcgtagggagcaagtggcgaaatctaaggaagca
ctagaggcgcgtcgaggggctttcatacatttggagcgtttgaatcatctgatcggttcg
gcagatggtgccaagttccgccgctttgcgcaaagtttaaccttggatcatttggtctat
ttagctaatcagcatttggacattttgcatcgtcgttatcaattaatgcgtaacgaagat
gctttgtctttgcttgtggtggatacttggcaagcaaatgcctcgcgagatactaagacg
ctgtctggcggtgaatctttcttagtgagtttggcattggcattggcattgtctgatttg
gtttcccataaaaccagtattgattctttgttcttggatgaaggctttggcaccttggat
agcgagacattggagtctgctcttgatgctttggataatttgcattcttccggtaagacc
attggtatcatcagtcatattagtgcgttaaaagagcgtattccggttcagattaagctc
actaaacaaagcggtttgggtgttagtcgactttcttctgaatttgctgtgcattcgccg
gaggagtga
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