Marinomonas rhizomae: KDW99_13555
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Entry
KDW99_13555 CDS
T08610
Symbol
rluF
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrhi03009
]
KDW99_13555 (rluF)
Enzymes [BR:
mrhi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
KDW99_13555 (rluF)
Ribosome biogenesis [BR:
mrhi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KDW99_13555 (rluF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
SLD5_C
Motif
Other DBs
NCBI-ProteinID:
UTV98287
LinkDB
All DBs
Position
complement(2874926..2875981)
Genome browser
AA seq
351 aa
AA seq
DB search
MFNASSTRLNKYISESGICSRRDADRFIEQGNVFINGKRASVGDQVVAGDTVRVNGQIIE
PQDADDFVFIVLNKPVGIVSTTESSEKNNIVDFVSHGVRIFPIGRLDKDSQGLIFLTNNG
DLVNKVLRAGNNHEKEYLVTVNKPITDDFIAGLAGGVPILGTMTKKCPVKKVTANVFNIT
LVQGLNRQIRRMCEHFGYEVMKLERTRIMNVSLKGVPVGEWRDLTQKELSVLLKSIEDSS
SEASAPAKKSRNAPRKNTRSDGVSKPKASTKPGAATKGNTKHPKDDSRKPVGSKGKDRRP
FGDGKKPAGNGAGGGKRPTGKPSGAPKGNGKPAPKGKRPANGRGPNKASRP
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgcttcatctactcgtttaaataaatacatcagcgaaagcggtatctgctct
cgaagggacgctgaccgctttattgaacaaggtaatgtgttcatcaatggcaagcgtgct
tcggtgggcgatcaggtggttgctggcgatacggtgcgagtgaatgggcaaattatcgaa
ccgcaagacgcagatgattttgtttttattgtgttgaataagccagttggcattgtgagt
actacggaaagctccgagaaaaataacattgtcgattttgttagccatggggtgcgtatt
ttcccaattggtcgtttggacaaggattctcagggtttgatctttttgaccaataatggc
gatctggtcaacaaggtattgcgtgccgggaataaccacgagaaggaatatttagtgacg
gtgaataagccgatcacagatgactttattgcaggtttggcaggtggtgtgccgatatta
gggacgatgacgaagaagtgtccggtgaaaaaagtcacggcgaatgtgtttaacattacc
ttggtgcaaggcttgaatcgtcagattcgtcgtatgtgtgagcattttggctatgaagtc
atgaagcttgaacgcacgcggattatgaatgtcagtctgaaaggtgttcccgttggtgag
tggcgagatttaacacagaaagaattgtctgtgttgcttaagtctattgaagattcttct
tcagaagccagtgcgccagcgaagaagtctcgcaatgcaccgcgtaaaaatacgcgttct
gatggtgtgtcaaaaccgaaagcttcaacaaaaccaggcgctgcgacgaaaggtaatact
aagcaccctaaagatgattctagaaagccggtgggttcgaaaggaaaagatcgtcgtcct
tttggtgatggtaagaagcctgcgggtaatggcgctggtggaggcaaacgtccgacaggt
aagccaagtggggcgccaaaaggtaacggtaagcctgctcctaaaggtaagcgtcctgca
aacggtcgtggccctaataaagcgtcgcgcccatag
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