Marinomonas rhizomae: KDW99_14630
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Entry
KDW99_14630 CDS
T08610
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KDW99_14630 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_14630 (recC)
Enzymes [BR:
mrhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KDW99_14630 (recC)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KDW99_14630 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
MTHFR_2
Motif
Other DBs
NCBI-ProteinID:
UTV98487
LinkDB
All DBs
Position
complement(3118791..3122183)
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AA seq
1130 aa
AA seq
DB search
MFQLYTGNRLEDLAVLLAKILAVSPPENPFDDESILVQNPGMAQWLKMFLAESHSIAAGL
VFPLPSTFVWQTFSQTLDDIPAQSEFNKPFLVWRLMRLLDTRLNEPEFQALSWYLEEDDT
QIRRFQLCSSIADIYDQYLVYRPDWIKSWEGGEAQDPRLKAIFEQQPWQAILWRDLVADV
SQQGTSLYHRGNLIEALHDATQSFSRPVGVPERIFIFGVSSLPPNTLESLRVLAVSGWID
VHLFLQNPCRFYWGDVVDKHYLGREIKRQTLKPGLSTDTLHLDANPLLASWGRLGRDYIA
QLQEMADSELEVFEDYRTEQSTGLLQWVQQDVLTLENHGSKEERDASIANAEYRHPVDVD
DQSIRVHLCHSPLREVEVLHDQLLQMFESDPSLTPKDVIVMLPDVNTYSPFVKAVFGGVK
GSAQVRKHIPFALIDQSGGMENPIVDAYLYLLGLGESRFTLSELISVLEVPAVLARFELT
ADELERIRQWSTEVGIRWGLDGKTAQQHDLPIQESHTWLNGVRRMLLGYAMGHDHIWEGA
LSYGDVEGLEASVAGKLAEFLVAINDAQAKLMESLAPKEWISTLYYLAERFFLLEEDDAF
QVLLTKQLDALTLQWQQAHFDSPLDQQVIRQLLSPLLQESQGGQRFLAGRVNFCTLMPMR
SVPFKVICVLGLNEGGYPRSVAPMGFDLMVGQYRSGDRSRREDDKYLFLEALMSARDCFY
ISYVGRSIQDNSEKNPSILVSELLEYIGQSCVFEGDQALAPDESQKTLLEKLILEHPLQP
FNAAYYATQSSVEVNSQSSDKRLYSYDEQWLPALLSVPMDDEYSEFAPLGGLEQPRLELA
LDELSRFIGHPTRYFTQRRLKAYLSLQEEEEKEDEPFALDGLAGYQLREGLLQAMLKGDD
DQFVERLSLMGALPYGALGRLSLQQSRGQCQQLFSVLQGYALEECEPIEVNLALGSIVLQ
AWLDLPTATTRLSYRIGDLSAHQKMQAWIEHLALCAQGTPKQHHLINLSKTGKLLQHSFI
LIPPKDAQEYLNTMLALLQQGLCQPIALPAKSADAWCKSYCSSKAQEDLDTAWEQALKLY
QDNSSAFTRSEVDDAYWQRYFPDLNRQKEAFVALCEQIWLPMHRHLEVME
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaactttacacaggtaaccgtctagaagatttagccgtgttgcttgcgaagatt
ctggctgtttctccaccagaaaatccgtttgatgatgaatccattttggtgcaaaacccc
ggtatggcgcaatggctgaagatgttcttagccgagtcgcattctatcgctgcgggtttg
gtgtttcctttgccttctacttttgtttggcaaactttttcgcaaaccttagacgatatt
cccgcgcagagtgaatttaataaacctttcttagtgtggcgcttgatgcgcttgctggat
actcgccttaacgaaccagaatttcaggcgctaagttggtatcttgaagaagacgatacg
caaattcggcgctttcagttatgcagcagcattgccgatatttacgatcaatatttggtt
taccgtccggattggattaaatcttgggaaggtggcgaagcacaagaccccaggctgaaa
gccatctttgagcagcaaccttggcaggctattttgtggcgcgatctggttgccgatgtg
agccagcaaggaacctcgctttatcaccgcggtaatctgattgaagctttgcatgacgcc
acacaatccttttcccgacctgttggcgtgccagagcgaatctttatttttggtgtgtct
tctttgccgccgaatacgcttgagtctcttcgcgtgttggcggtgtcgggctggattgat
gtgcatctgtttttgcagaacccttgtcgtttttattggggcgatgtggttgataaacat
tacttaggtcgagaaataaaacgccaaactctcaagcctggattgagtaccgatactttg
catttggacgccaatcctttgttagccagttgggggcgcttgggccgagactacattgcg
cagctacaagaaatggctgatagcgaactagaagtattcgaagattatcgtactgagcaa
tcgacagggttactacagtgggttcagcaagacgtgctgactttagaaaatcatggttcg
aaagaagaaagagacgccagcattgctaatgccgagtatcgacaccctgtcgatgttgat
gatcagagtattcgtgtacacctttgtcatagtccgttacgggaagtggaagtcttgcat
gaccagctgttgcaaatgtttgagagtgatccgagcctgacgccaaaagacgtcatcgtt
atgttgcccgacgtcaacacttacagcccctttgtaaaagccgtctttggtggtgtaaaa
ggtagcgcgcaagttaggaaacacattccctttgccttgatcgaccagtctggtggtatg
gaaaacccgattgtcgatgcctatttgtatttgcttggtttgggcgaaagtcgtttcacc
ttgtccgaattgatcagcgtattagaagtgcctgcggtgttagcgcgttttgaattaacc
gccgatgaattagagcgtattcgtcaatggtcgacggaagtgggtattcgttgggggttg
gatggcaaaaccgcgcagcaacatgatctgccaatacaagaatcgcacacatggctaaat
ggcgtacgtcgcatgttattgggttacgccatgggtcacgatcatatttgggaaggcgcg
ctaagttacggcgatgtggaaggtttagaagcgtcggtggcgggtaaactggcggagttc
ttggtcgccattaatgatgctcaagcgaaattgatggaatctctcgcgccgaaagaatgg
atttcgactctgtattatttggcagagcgtttctttttattggaagaagacgatgctttt
caggtcctactgactaagcagcttgatgccttgaccctgcaatggcagcaagcgcatttt
gattccccattagatcagcaagtgatacgccagctgttatctcctttgttacaagaatct
caaggcggtcagcgcttcttagcaggtcgagtgaacttttgtaccttgatgcccatgcgt
tctgtgccctttaaggttatctgtgttttgggtttaaacgaagggggttatcctcgtagt
gttgcgccgatgggatttgacctgatggttgggcaatatcgcagtggcgaccgaagccga
cgggaagacgataaatacttgttccttgaagcactgatgtcagcacgagattgtttctat
atcagttatgtggggcgcagtattcaagacaacagtgagaaaaatccgtctatcttggtg
agtgagctgttggaatacataggtcaaagctgtgtgtttgaaggcgatcaggcattagcg
ccagacgagtcgcagaaaactttgttagaaaaactgattctcgaacatccgctgcagcca
tttaatgccgcctactatgcgactcagtcgtctgtagaagtcaattcgcagtcatctgat
aagcgcttgtacagctatgacgaacaatggttgccagctctgcttagcgttcctatggat
gatgaatattccgagtttgcaccgctgggtggtttagagcaaccaaggttagagcttgct
cttgatgaattgtcgcgttttattggccatccgacgcgttactttacccagcgtcgatta
aaagcttatttgagtctgcaagaagaggaagagaaagaagacgagccgtttgccttggat
ggcttggcaggttatcaattacgcgaaggtttgctacaagccatgctaaaaggcgatgac
gatcagtttgtcgagcgcttatctttaatgggcgccttgccttatggcgcgctgggtcgc
ttgtctttgcagcagagtcgtggtcaatgtcagcagcttttctctgttttgcaaggttat
gcattggaagagtgcgaaccgattgaagtgaacttggcccttggcagtattgttctgcaa
gcttggttggatttgccaacggcgaccacgcgtttgtcttatcgcattggtgacttatct
gcccatcaaaaaatgcaggcgtggatcgagcatttagctttgtgtgcgcaaggtacgcca
aagcagcatcatcttattaatctgagcaaaaccggcaagttactacagcatagttttatc
cttatcccgccgaaggatgctcaagaatatctaaacactatgttggcgttattgcagcaa
ggcttgtgtcagccgattgccttaccggccaaaagtgcggatgcatggtgtaagagctat
tgttcgagcaaagcgcaagaagacttggatacagcttgggagcaagcattgaagctttac
caagacaacagcagcgcctttactcgtagtgaggtggacgatgcttattggcagcgttat
ttccccgatttaaatcgccaaaaggaagcgtttgtcgctttgtgtgaacaaatctggttg
cccatgcatcgtcatttggaggtgatggaatga
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