Marinomonas rhizomae: KDW99_15615
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Entry
KDW99_15615 CDS
T08610
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi02020
Two-component system
mrhi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KDW99_15615
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KDW99_15615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mrhi02022
]
KDW99_15615
02035 Bacterial motility proteins [BR:
mrhi02035
]
KDW99_15615
Two-component system [BR:
mrhi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
KDW99_15615
Bacterial motility proteins [BR:
mrhi02035
]
Flagellar system
Flagellar assembly proteins
Others
KDW99_15615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
MCM
AAA_2
AAA
HTH_24
HTH_30
Mg_chelatase
HTH_11
MerR
AAA_16
HTH_20
AAA_19
TIP49
HTH_28
HTH_23
FleQ
AAA_3
AAA_22
ATPase
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UTV98670
LinkDB
All DBs
Position
complement(3317187..3318533)
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AA seq
448 aa
AA seq
DB search
MSEVKLLIVEDDKGLAEALEDTLMLASYQCKIVYSAEEAVVALKHSLFDMVVSDVNLPGM
DGYGLLHHVIDTYPELPIMLMTAYGDIAHAVEAMRDGAVDYLLKPFQEEELLNAIAKYTI
KEAPSANPQPIAKDPSSIALLELAKRVAVTDSTVLICGESGTGKEVLAHFIHQNSSRPHA
PFVAINCAAIPENMLEAILFGYEKGAYTGAVSSQAGKFEQANGGTLLLDEITEMDVGLQA
KLLRVLQEQEVERLGGKKSIPLDVRIIATTNRDLADYVRDGGFREDLYYRLNVFPLRWLP
IRERKGDILPVAQSLLAKHAAKMRITGAVLKPSAQSKLESHPWPGNVRELDNVIQRALIL
SPNAQINEDHIAFDMMSLAPVVVETVADEDSAASILGKGVQQHEFRIIAQALVDANGKRK
VVADKLGISPRTLRYKIAKMRESGIDVD
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagttaagttattaattgtagaagacgacaaagggctggctgaggcgttagaa
gatacgctgatgttagcaagttaccagtgcaaaatagtatatagcgctgaagaggctgtg
gtcgcattgaaacatagcttatttgacatggtggtatctgatgtgaatctgcctggtatg
gatggctatggcttattgcaccatgttattgatacatatccagaactgcctattatgctg
atgacggcttacggtgatattgctcatgccgtagaagcaatgcgtgatggtgctgttgat
tatttattgaagccttttcaagaagaagagcttctcaacgccatagcaaaatacacgata
aaagaggcaccatctgccaaccctcagcctatcgcaaaagacccatccagtattgcttta
ttggagctggcaaaacgtgttgctgttacggattcaaccgtcttaatttgtggtgaaagt
ggtacaggtaaagaagtgcttgctcactttattcatcagaactccagtcgacctcatgcg
ccttttgttgccattaactgtgcggcgattcctgaaaatatgcttgaagccattcttttt
ggctatgaaaaaggggcttacactggcgccgtgtcttctcaggcgggtaagttcgagcag
gctaatggtggaactttgttgcttgatgagattactgaaatggatgttggcttgcaggcc
aaactgttgagggttctgcaagaacaagaggtggagcgtcttggtggcaaaaagtccatt
cctttggatgtgcgaattatagcaacaactaaccgcgatcttgctgactatgttcgcgat
ggcggctttagggaagatttgtattatcgcctgaatgtttttccactgcgttggttgcct
atccgtgagagaaagggtgatattttgcctgttgcacagagtttgcttgcaaaacacgct
gcaaaaatgcggattactggtgcagtgttaaaaccatctgcgcaaagtaaattggaatcg
cacccttggccaggtaatgtccgtgaacttgataatgttattcagcgagctttgattcta
agtccaaatgcgcagattaacgaggatcatatcgcgtttgatatgatgagtttggcgcct
gtcgttgttgaaaccgtcgctgatgaagacagtgcagcttcaatattaggtaagggggtt
cagcagcatgaatttcgtatcattgcgcaagcattggtcgatgcaaacggcaaacgtaaa
gttgttgcagataaattgggtatcagtcctagaactttacgctataaaatcgctaaaatg
cgagaaagtggcatagacgttgattga
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