Marinomonas rhizomae: KDW99_19255
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Entry
KDW99_19255 CDS
T08610
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDW99_19255 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_19255 (uvrA)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDW99_19255 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KDW99_19255 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_25
DUF3667
OTT_1508_deam
Motif
Other DBs
NCBI-ProteinID:
UTV99349
LinkDB
All DBs
Position
4125080..4127902
Genome browser
AA seq
940 aa
AA seq
DB search
MDTITIRGARTHNLKNVDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDIDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARAGQPRC
PDHGEPLEAQTISQMVDKVISLPEETKMMLLAPIVKDRKGEHLHTISDLLSKGFIRARID
GIVVDLDDAPILEKNKKHTIEVVIDRFKVRSDLQLRLAESFETCLGLSDGIAKVINMDDE
KEEYIFSSKFACPVCGYSLTELEPRLFSFNNPNGACQTCDGLGTHQMFDPDRIIQDETLT
LAEGAIRGWGRRSIFYYQQLSALAKHYGFDIESRYKDIPSDFKKRILHGSGKDKIDFIYI
NERGDKMTRSHSFEGVIPNLQRRYHETESDSVRDDLSQYISIQPCPDCHGSRLNRSARNV
FIAEQTLPEVVTYPIAECLKYFETLELPGSRGEIASKILKEIRDRLTFLVNVGLDYLTLD
RKADSLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLIATLTRLRDLGNTV
IVVEHDEDAIRIADFVVDIGPGAGVHGGQIIASGTPQDIMDCPESVTGQFLTGKRKIEIP
PIRHQAKDKQFLKLIGATGNNLNTVDLNIPVGVMTCITGVSGSGKSTLVNGTLYPLAATA
LNGATTLKAAPHERIEGLDLFDKCVDIDQSPIGRTPRSNPATYTGIFTPMRELFSATQES
RSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDTCKGKRYNRETLEIHYK
GKNIHECLDMTIEDAREFFDPVPSIARKLQTLMDVGLGYIRLGQAATTLSGGEAQRVKLA
KELSKRDTGTTLYILDEPTTGLHFADIEQLLKVLHRLRDHGNTVVVIEHNLDVIKTADWI
VDLGPEGGSGGGYIVAEGTPEEVAQAEKSHTGRFLKQMLN
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataccattaccatacgcggggcccgcacacacaatttaaaaaatgtggacctagac
atcccaagagacaaacttgtggtgattactggcctatccggctcaggtaaatcctctctc
gcctttgacactttatacgccgaaggacaacgtcgctatgtagaatccctttcgacatac
gctagacagtttttgtccatgatggaaaaaccagacatagaccacattgaaggcctttct
cctgctatttcaatcgagcaaaaatcaacttctcataacccacgatcaacagtcggtaca
ataacagaaatatacgattatctacgattgttatttgcccgcgcaggacaaccacgctgc
ccagatcatggtgagccattagaggcgcaaaccatatcacaaatggtcgataaagttata
tcgctcccagaagaaactaagatgatgctgctagcccctatcgtcaaagatcgaaaaggt
gagcacttacataccattagtgatctgctttctaaggggtttattcgcgctagaattgat
ggcattgtcgttgatctagacgatgcgccaatattagaaaaaaataagaaacatactatt
gaagtggtcattgaccgctttaaggtacgttctgacctccaactgcgcttggcagagtct
ttcgaaacttgccttggtctctctgatggtatcgccaaagtcatcaatatggatgacgaa
aaagaagaatatattttctctagtaaatttgcctgtccagtttgtggctacagcttaacc
gaactagagcctcgacttttttcgttcaacaacccaaatggcgcttgtcagacttgtgac
ggtttaggcactcatcagatgttcgatccagatcgaatcattcaagacgagacactcaca
cttgctgaaggtgccatccgaggctggggccgacgtagcatcttttattatcaacaactg
agtgcgctagcgaaacattacggattcgacattgagtcaagatataaagacattcctagt
gactttaaaaagcgaattctgcatggctcaggaaaagacaagatagatttcatttacatc
aatgaacgtggcgataaaatgacgcgctcacactcatttgaaggcgttattccaaaccta
cagcgccgctaccatgaaacagaatcggacagcgtacgtgacgacctctcacaatacatc
agcattcagccttgtccagattgtcatggctctcgattgaatcgatccgctcgtaacgtc
ttcattgctgagcaaacgcttccagaagtggtgacttatccaatcgcagaatgcttgaag
tatttcgaaacactagagcttccagggtcacgcggtgaaatcgcctctaaaatccttaaa
gagattcgtgaccgcttaaccttcttggtaaacgtaggcttggactatctaactttagac
cgtaaagcagactcattatcaggcggtgaagcacagcgaatcagacttgctagccaaata
ggtgccggcctagtaggcgtaatgtacatcctagatgagccttccattggtctgcatcaa
cgcgataatgaacgactcatcgccacactaaccagactccgagatttgggaaataccgtt
attgtggtagagcatgatgaagacgcgattcgtattgcagactttgttgtcgatattggc
ccaggcgctggtgttcacggtggtcaaatcattgcaagtggcacacctcaggatattatg
gattgtcctgaatccgttactgggcaattcctaacgggcaaacgtaaaattgaaatacct
cccattcgccatcaagcaaaagacaaacaattcctcaagctgataggcgcaacaggcaat
aacttaaatactgttgatctcaacatccctgttggagtaatgacctgtataaccggcgtt
tcaggttctggtaagtcgactctagtaaatggcactctatatcctcttgctgcaacggca
ctcaatggcgcaaccacattaaaagcggcaccacacgagcgtatagagggactagattta
ttcgacaagtgtgtagacattgaccaaagccctattggtcggacgccaagatccaaccct
gctacctacacgggtatttttactccaatgagagagctcttctcggcaacacaagagtct
cgttcacgtggttataaaccgggcagattcagttttaacgtcaaaggcggccgctgtgag
gcctgccaaggtgatggtgtcattaaagtagaaatgcactttcttcctgacgtctatgtg
ccatgtgatacctgcaaaggcaaacgctacaatcgtgaaacattagagatccattacaaa
ggcaagaacattcacgagtgcttagatatgacgattgaagatgctcgagagttttttgat
ccagtcccttctattgcaagaaaactgcaaaccttaatggatgtgggcttaggttacatc
cgccttgggcaagcagccacaacgctgtctggtggcgaagcacagcgggttaaactcgca
aaagaactatctaaacgcgacacaggcacaacgctctacattttagatgagccgacaaca
ggactacactttgcggatatagaacaactgctcaaagtgcttcatcgcctaagagatcac
ggcaatacagtcgttgtcattgaacacaaccttgatgtaataaaaactgctgattggatt
gttgacttaggcccagaagggggcagcggtggcggctacattgtcgctgaaggaacgccg
gaagaagttgctcaagctgaaaaatctcatactggtcgcttcttaaaacaaatgcttaat
tag
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