Marinomonas rhizomae: KDW99_19265
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Entry
KDW99_19265 CDS
T08610
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KDW99_19265 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrhi03021
]
KDW99_19265 (rpoA)
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_19265 (rpoA)
Enzymes [BR:
mrhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KDW99_19265 (rpoA)
Transcription machinery [BR:
mrhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KDW99_19265 (rpoA)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KDW99_19265 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UTV99351
LinkDB
All DBs
Position
complement(4128458..4129462)
Genome browser
AA seq
334 aa
AA seq
DB search
MQRSVSELLTPRNIEVQELGNCRAKVTLQPLERGFGHTLGNALRRILLSSMPGCAIVEVE
IDGVLHEYSAIEGVKEDVIEILLNLKGVAIALHGQDEATLTLSKKGPGIVTAGDIQLVAD
AEIANPDHVIAHLDDTAELTMQIKVARGRGYEPADARVAGDDETRPIGRLQLDASFSPVR
RVAYSVDNARVEQRTDLDKLVLDIESNGTIDPEEAIRRAATILQQQIAVFVALESESEAP
VVEEEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLAQRGLSLGMRLENWPPASLKDDSKVLAR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgagcgaattgttaaccccacgcaacattgaagttcaggaattaggc
aactgtcgcgctaaagttacactgcaaccactagaacgtggttttggtcatactttaggt
aacgcactgcgccgtatcctgctttcttcaatgccaggttgtgcgattgttgaagtcgaa
atcgacggtgtattacacgaatacagcgcaatcgaaggggttaaagaagatgtaattgaa
attcttcttaacctgaaaggagttgcgatcgctctacacgggcaagatgaagcaactctt
actctaagtaaaaaaggtcctggtatcgtaacagctggagatatccagttggttgctgat
gcagagatcgctaacccggatcatgttattgcgcacttggatgacactgcagagttaact
atgcagatcaaagtcgctcgtggccgtggttatgagcctgctgatgctcgtgttgctggc
gacgatgagactcgtccaatcggtcgcttgcaactggatgcctcattcagccctgttcgc
cgtgttgcgtacagtgtcgataatgctcgtgtagagcagcgtacagatttagataagcta
gtcttagacatcgaatctaatggtactatcgaccctgaagaagcaattcgtcgtgcagcg
actattttacaacagcaaatcgcggtttttgtcgcccttgaaagcgaaagcgaagcacct
gttgtagaagaagaggatgagattgatccaattttgctacgcccggttgatgatcttgaa
ttgaccgttcgcagtgctaactgtttaaaagcagagaacatttattacatcggtgatttg
attcaacgtactgaggttgagcttcttaagacgcctaacctaggtaagaagtcgttaact
gaaatcaaagatgttttagcacagcgtggtttgtctttgggaatgcgtttagagaattgg
ccaccggctagtttgaaagacgatagcaaagttctagctcgctag
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