Marinomonas rhizomae: KDW99_19915
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Entry
KDW99_19915 CDS
T08610
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
mrhi
Marinomonas rhizomae
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrhi03000
]
KDW99_19915
Transcription factors [BR:
mrhi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
KDW99_19915
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
UTV99469
LinkDB
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Position
complement(4264212..4265030)
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AA seq
272 aa
AA seq
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MDNKLRNTDKSIFETLTDLCFADHYPHRVLVLRSQSVPHSEETPWHKHQKGQLVLPLTGV
VTSFIDDKMWLVPPRCAVWIPSNEMHRNQISPNADVCMLFVDGRDLPLPEVACTLTVTPF
VRELILHLHSQQRYEETDLATDRLVDVLIDQLIQLEREEFDFPIPDEPTLNRLALELIAR
PNEKRTLGEWASDFAMSERTLARMIKRHVELTFGQWRSQLHIVLALQKLAINMPIQTISE
ELGYDSVSAFITFFKKALGKSPRQYRIERWGK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
ttggacaataaattgcgaaatacagacaaaagcatttttgagacactgaccgacctttgt
tttgcggatcattatccgcatcgcgttcttgttttgcgctcgcaatccgtgccgcatagt
gaagaaacaccttggcacaaacatcaaaaaggccaactggttttaccactcactggcgtt
gttactagctttatcgacgacaaaatgtggcttgtgccgccacgttgcgcagtgtggatt
ccaagtaatgagatgcatcgcaaccagatatcgcccaatgctgacgtttgtatgttgttt
gttgatggccgtgatttaccgctgccagaagttgcttgtaccttgacggtcacgcccttt
gtacgtgaactgatattgcatttgcattcgcaacaacgctatgaagaaaccgaccttgca
acagatcggctggttgatgtcctgatcgaccagcttattcagttggagcgggaagagttt
gatttccccattccagacgaaccaacactcaaccgtctcgctcttgaactgattgccaga
ccgaacgaaaaacgcactctaggcgaatgggccagcgacttcgctatgagcgaacgcact
ttggcgcgaatgattaagcgtcatgtagagctcacttttggtcagtggcgaagtcagctt
cacattgttcttgctctgcaaaagctagcgatcaacatgccgatccaaaccatctccgaa
gagctaggctacgactccgtcagcgcttttatcaccttctttaaaaaagcgctgggcaaa
tcaccaaggcaatatcggatcgagcggtggggaaagtaa
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