Marinomonas rhizomae: KDW99_20185
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Entry
KDW99_20185 CDS
T08610
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mrhi
Marinomonas rhizomae
Pathway
mrhi03420
Nucleotide excision repair
mrhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KDW99_20185 (uvrD)
03430 Mismatch repair
KDW99_20185 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrhi03400
]
KDW99_20185 (uvrD)
Enzymes [BR:
mrhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KDW99_20185 (uvrD)
DNA repair and recombination proteins [BR:
mrhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KDW99_20185 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KDW99_20185 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTV99521
LinkDB
All DBs
Position
complement(4325237..4327450)
Genome browser
AA seq
737 aa
AA seq
DB search
MDVSFILDSLNDKQREAVAAPLQNSLVLAGAGSGKTRVLVHRIAWLMHAYELSPYSLMAV
TFTNKAAREMQGRIEQLVGVPPQGMWVGTFHGLAHRLLRAHWRDAGLKENFQIMDSDDQL
RLIKRIMRELNIDDTRWPPKQVSWFINAQKDEGRRAAHVPDSHDPFSKGMRELYYHYEEA
CERGGLLDFGELLLRAHELMLSTPALLRHYQDRFRHVLVDEFQDTNTIQYAWLRIMVGSE
GTITAVGDDDQSIYGWRGAKIENIQNFTKDFKDVGTIRLEQNYRSTGHILNAANGLIKHN
DDRLGKELWTDSGEGDPISLYAGFNEQDEARFIIGIIKQWRDKGTSLTDMAILYRSNAQS
RVIEECLVREQIAYRIYGGHRFYDRLEIKNALAYARLALDPNDDGAMERVINVPPRGIGE
RSIGTLREFARDHGCSMWQAAQEIVRQSLMAGRATNAIKAFLHLIEGLSTTVQQPDLNLN
DIFEQIIEEAGLIPFHEKEKGEKGEARIENLKELVGAAGGFSWSDEDEEFSSPLMAFLDK
AVLDAGDAQADEYQDAVQLMTLHSAKGLEFPLVFLTGVEENIFPSKMSFEEPGRLEEERR
LCYVGITRAMEKLYITYAESRRLFGSESFNSPSRFIKELPPECLEEVRLRSQVSRPVSMQ
RPDYNFEKNKLQNSNVLNSYKAPEISVNMGDRVNHPVFGEGLVINYEGQGPQARVQVNFD
DEGTKWLVLSFAKLEVL
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttttatcctcgactcattgaatgacaagcagcgtgaagccgttgcagcg
cctctgcaaaatagccttgttttggctggcgctgggtcaggaaaaacccgagtcctagtg
caccgtatcgcatggttgatgcacgcttacgaattgtcgccttacagcttaatggcagta
acctttaccaacaaagcggctcgtgaaatgcaaggccgtattgagcagttggtgggcgtt
cctcctcaaggcatgtgggttggaacctttcacggcttggcacatcgcttattgcgtgct
cattggcgtgatgcgggactaaaagaaaacttccagattatggacagcgacgatcagctg
cgactcatcaaacgcatcatgcgagaactgaacatcgacgatactcgctggccgcctaag
caagtgtcttggtttatcaacgcacaaaaagacgaaggccgccgagcggctcatgtgcca
gacagccatgaccctttttccaaaggcatgcgcgagttgtattaccactacgaagaagct
tgtgaacgtggcggattattggatttcggcgaattgttattgcgtgctcatgaattgatg
ctcagtacgccggcgttgctacgccattatcaagatcgctttcgtcatgtgctggtggac
gagtttcaagataccaacacgattcaatacgcgtggttgcgcatcatggtgggcagtgaa
ggtacgattactgcggtaggcgatgatgaccaatcgatttatggctggcgtggcgcgaaa
attgaaaatattcaaaacttcaccaaagattttaaagacgttggcaccatccgattggag
caaaactaccgttcaaccggtcatatcctgaatgcggcaaatggtttgatcaaacacaac
gacgatcgcttaggtaaggagctttggacagatagcggtgaaggcgaccctatttctctt
tatgcagggtttaacgagcaagacgaagcgcgttttatcattggcattatcaaacaatgg
cgtgacaagggaacgtctctgacggacatggcgattttgtatcgctccaatgctcagtct
cgtgttatcgaggaatgcttagttagggaacagattgcttatcgaatttatggtgggcac
agattctatgatcgtcttgagatcaaaaacgccttggcttatgcgcgtttggcgttggat
ccgaatgacgatggtgcgatggagcgagttatcaacgtgccgcctcgtggtattggtgaa
cgcagtattggtacgctacgagagtttgcccgtgaccatggttgctctatgtggcaagca
gcgcaagaaatagtacgtcagtccttaatggcagggcgcgcgaccaatgccatcaaggcg
tttttgcatctaattgaaggcttgagcaccacggtgcagcagcctgatttgaatctgaat
gatattttcgagcagattatcgaggaagccggcttgatccctttccacgaaaaagagaaa
ggcgagaagggcgaagcacggatcgaaaacttgaaagagttggttggtgcggctggcgga
ttcagttggagcgacgaagacgaagaatttagctctccgttgatggcgttcttggacaaa
gcggtattggatgcaggcgatgcgcaagcggacgaataccaagatgccgtgcagttgatg
acattgcattcggcgaaaggtctagagttcccattggtgttcttaacgggcgtagaagaa
aacatcttccccagcaagatgtctttcgaagaacctggtcgactcgaagaagagcgtcgt
ctttgctacgtgggcattactcgcgcgatggaaaaactgtacatcacctatgcggaatct
cgtcgtttgttcggtagtgaatcgtttaacagcccttcgcgctttatcaaagagttgcca
ccggaatgcttagaagaagtacgtcttcgctctcaagtaagtcgtcctgtgtctatgcag
cgtccagattacaactttgaaaaaaataaactgcaaaacagcaatgtattaaacagttac
aaggcgccagaaatcagcgtcaacatgggggatcgagtcaatcacccggtgtttggtgaa
ggtttggtaatcaactacgaaggccaaggcccacaagcacgcgtacaggttaacttcgac
gatgaaggcaccaagtggctggtgttgtcgtttgctaaattggaagtgctttag
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