Maioricimonas rarisocia: Mal4_08680
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Entry
Mal4_08680 CDS
T06940
Symbol
ligT
Name
(GenBank) 2'-5'-RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mri
Maioricimonas rarisocia
Brite
KEGG Orthology (KO) [BR:
mri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mri03016
]
Mal4_08680 (ligT)
Enzymes [BR:
mri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Mal4_08680 (ligT)
Transfer RNA biogenesis [BR:
mri03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Mal4_08680 (ligT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
BAT
Motif
Other DBs
NCBI-ProteinID:
QDU36581
UniProt:
A0A517Z279
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All DBs
Position
complement(1117299..1117859)
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AA seq
186 aa
AA seq
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MAENVRCFIAAKIPATPPLREVLEALGEMGRAVKPVSADNLHVTLKFFGDVPREQTAAIG
RTLQEVTASVEAFEVTLKGLGAFPHPGRPSVIWAGMDEAEPLIQLAAELEDQLESQGFVR
ESRPFHPHLTLARIKARPPESLRGLLQQCESSEFGAAHIDHVDLYESELRREGPVYTVLA
RGELEA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaacgttcgctgtttcatcgctgcaaaaatcccggccacgcccccattgcgg
gaggttctcgaagccctcggtgagatggggcgggccgtcaaaccggtctcggccgacaac
ctccacgtgacgctcaagttctttggcgatgtaccgcgggagcagaccgcggccattgga
cgaacgctgcaggaagtgacggcttccgttgaagcgttcgaggtcacgctgaaggggttg
ggagcctttccgcatccggggcgtccgtcggtgatctgggccggaatggacgaggccgag
ccgctgattcagctggctgctgaactggaggaccagctcgaatcgcagggattcgtccgg
gagagtcggccgttccatccgcacctgacgctggcccgcatcaaagccaggccgccggag
tcgctgcggggactgctgcagcagtgtgagtcgagcgagttcggggccgctcacatcgac
cacgtcgatctgtacgagtcggaactgcggcgggaaggtccggtgtatacggtgctggcc
cggggtgagctcgaggcgtga
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