Maioricimonas rarisocia: Mal4_21210
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Entry
Mal4_21210 CDS
T06940
Symbol
hrdB
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
mri
Maioricimonas rarisocia
Pathway
mri02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mri00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Mal4_21210 (hrdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mri03021
]
Mal4_21210 (hrdB)
Transcription machinery [BR:
mri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Mal4_21210 (hrdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
MerR_1
Mor
Sigma70_r4_2
HTH_29
MerR
HTH_17
HTH_23
HTH_11
HTH_28
HTH_38
Sigma70_r1_2
HTH_Tnp_ISL3
KORA
RasGAP
DUF3431
DUF6800
Motif
Other DBs
NCBI-ProteinID:
QDU37804
UniProt:
A0A517Z5R6
LinkDB
All DBs
Position
complement(2812789..2814453)
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AA seq
554 aa
AA seq
DB search
MNSFRNPAMKQLTEQQVRYTPIDVRIDQMDRAERLVAELDPQKSYRYVDLCERITTFRTE
LYPDLVVEGKDAIHDLRRFVEELSASANIPVEMAGEKVYTVNELSKKFNVSTKTVDRWRK
RGLVSRRFRFGNRTRVGFLNSSVERFVREHSDEISRGSRFSQLSEQEREEIIRKARRLAR
YGACPSEVSRRLSRMFDRAPETIRYTLKQYDEEHPENAVFPNANAPLSDNKKQEIYQRYR
RGVAAERLARDFCRTRTSIYRIIGEVRAERLFEQPIDYMDSDDFREPNAEELILGPPPEV
EKKGPRVKAPPGLPPYLASLYTIPLLTREEEVYYFRKMNYLKYRAAELRDSIDRNRPKAR
DLDQLEERLQGAVEIKNFLIRSNLRLVVSIAKRHMKPSSNFFEMVSDGNMSLIRAIEKFD
YTKGNKFSTYASWAIMKNYARSIPAEHTLLDRFRTGTDEIFQASRDDRSSQYEDEAVNSR
QHQVIMAILDQLDERERAIIMHRYGLEQGTEPQTLEQVGAQFGVTKERIRQLESRALQKL
RKIAHEEKLDIPGV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgtttcgcaacccggcgatgaagcagctgacggaacaacaggtccgctataca
ccgatcgacgtgcgcatcgaccagatggatcgcgccgaacggctcgtcgccgagctggat
ccgcagaaatcctatcgatacgtcgacctctgtgagcggatcacgaccttccggacggaa
ctctaccccgacctcgtcgtcgaggggaaagacgccatccacgacctgcgacggtttgtc
gaggagctctcggcaagcgccaacatcccggtcgagatggcgggcgagaaggtctatacg
gtcaatgagctgagcaaaaagttcaacgtctccacgaaaaccgtcgaccgctggcggaaa
cggggcctggtgagccgccggttccgcttcgggaaccgcacacgcgtcggattcctgaat
tcgtcggtcgagcggttcgtgcgggagcactccgacgagatcagccgcggctcgcggttc
agtcagctcagcgagcaggagcgggaagagatcatccgcaaggcccgtcgactggcccgc
tacggggcctgcccgtccgaagtcagccgccggctgtcacggatgttcgaccgggcaccg
gagacgatccgttacacgctcaagcagtacgacgaagagcatcccgagaacgcggtcttc
ccgaatgcgaatgccccgctctcggataacaagaagcaggaaatctaccagcggtaccgt
cgcggcgtcgccgccgaacggctcgctcgcgatttctgccgcacccggacgagcatctac
cgcatcatcggcgaagtccgggccgaacggttgttcgaacagccgatcgactacatggac
agtgacgacttccgcgagccgaacgccgaagagctgatcctcggtccgcctccggaagtc
gagaagaagggtccgcgggtcaaggcgcctccgggactgcctccgtacctggcgagcctg
tacaccatcccgctcctgacgcgggaagaagaggtgtactacttccggaagatgaactac
ctgaagtaccgtgccgccgaactgagagactcgatcgaccgcaaccggccgaaggcccgc
gatctcgatcagctcgaggaacggctgcagggagccgtcgagatcaagaacttcctgatt
cgcagtaacctgcgactggtcgtctcgatcgcgaagcgacacatgaagccttcctcgaac
ttcttcgaaatggtcagtgacgggaacatgtccctgatccgtgccatcgaaaagttcgac
tacacgaagggcaacaagttctcgacgtacgcgtcgtgggccatcatgaagaactatgcc
cggtccattcccgccgagcacacgctgctcgaccggttccggacaggcaccgacgagatc
ttccaggcctcgcgcgatgaccgctccagccagtacgaagacgaagcggtcaattcccgc
cagcatcaggtcatcatggcgattctcgatcagctcgacgaacgtgagcgggcgatcatc
atgcatcgctatggcctcgagcagggaaccgagccccagactctcgaacaggtgggggcc
cagttcggtgtgaccaaggagcggattcgtcagctcgagtcacgtgccctgcagaagctg
aggaaaatcgcgcacgaagaaaagctggacatcccgggcgtctga
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